生物技术通报 ›› 2019, Vol. 35 ›› Issue (12): 196-202.doi: 10.13560/j.cnki.biotech.bull.1985.2019-0358

• 技术与方法 • 上一篇    下一篇

利用旁侧引物提高重叠延伸PCR定点突变效率

王柳月, 李慧美, 马梦琪, 梁明星, 贺如阳, 陈华波   

  1. 湖北文理学院医学院,襄阳 441053
  • 收稿日期:2019-02-18 出版日期:2019-12-26 发布日期:2019-12-03
  • 作者简介:王柳月,女,本科,研究方向:细胞周期调控;E-mail:wangly3210@163.com
  • 基金资助:
    湖北省自然科学基金项目(2016CFB318)

Improve the Site-directed Mutagenesis Efficiency of Overlap Extension PCR by Outboard-primers

WANG Liu-yue, LI Hui-mei, MA Meng-qi, LIANG Ming-xing, HE Ru-yang, CHEN Hua-bo   

  1. Medical College,Hubei University of Arts and Science,Xiangyang 441053
  • Received:2019-02-18 Published:2019-12-26 Online:2019-12-03

摘要: 平行模板法简化重叠延伸PCR定点突变流程的思路不能成立,靠近DNA末端的低效限制性酶切才是制约其突变效率的核心原因。故以旁侧引物法提高DNA产物的酶切效率,增加定点突变的成功率。将上、下游引物匹配位点由两侧酶切位点外延50-100 bp,使目标基因两端的酶切位点处于第二轮PCR产物的两端近侧,而非末端。由此提高随后的酶切效率,节省反应时间。由于此时酶切会明显缩短DNA长度,凝胶电泳结果显示仅1 h就完成了对PCR产物的充分酶切。连接产物转化感受态大肠杆菌后形成的克隆数也明显增加,且阳性率由33%-70%提高至100%。经对比检测,旁侧引物法既节省了工作时间,也极大地提高了重叠延伸PCR定点突变过程中的菌落形成数与突变成功率。

关键词: 重叠延伸PCR, 定点突变, 旁侧引物

Abstract: Simplifying overlap extension PCR(OE-PCR)protocol in site-directed mutagenesis by parallel template is not valid. The low efficiency of restriction enzyme cleavage close to the end of DNA fragments is the key reason of restricting the site-directed mutagenesis by OE-PCR. The enzymatic digestion efficiency of DNA product is improved by Outboard-primers method,and as a result,the achievement ratio of site-directed mutagenesis increases. The matching loci in upstream and downstream primer were outward moved by 50-100 bp with a pair of outboard-primers;therefore,the enzymatic digestion sites at both ends of target gene were far from the ends of the second round PCR product. Thus,the subsequent enzyme digestion efficiency was improved and the reaction time was saved. Because the length of DNA was obviously shortened by enzymatic digestion at this time,the results of gel electrophoresis showed that the PCR product was fully digested in only 1 h. The number of clone after ligating the transformation of the products into receptive Escherichia coli also increased significantly,and the positive rate increased from 33%-70% to 100%. Comparing with traditional terminal primers,outboard-primers method not only saves time,but also remarkably increases the positive colony number and success rate in site-directed mutagenesis of overlap extension PCR.

Key words: overlap extension PCR, site-directed mutagenesis, outboard-primer