Biotechnology Bulletin ›› 2021, Vol. 37 ›› Issue (11): 57-64.doi: 10.13560/j.cnki.biotech.bull.1985.2021-1091
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CHEN Wei-min(), CHAI Hong-mei, YANG Wei-xian, MA Yuan-hao, ZHAO Yong-chang()
Received:
2021-08-27
Online:
2021-11-26
Published:
2021-12-03
Contact:
ZHAO Yong-chang
E-mail:chwmkm@aliyun.com;yaasmushroom@aliyun.com
CHEN Wei-min, CHAI Hong-mei, YANG Wei-xian, MA Yuan-hao, ZHAO Yong-chang. Characterization of B Mating Loci Identification and Application in Cyclocybe aegerita and C. salicacola[J]. Biotechnology Bulletin, 2021, 37(11): 57-64.
菌株 Strain | 种类 Species | 采集地 Collection site | 线粒体小亚基MtSSU rDNA variable domain sequence | Cbmr类型 Cbmr type Type-1/type-2 | |||||
---|---|---|---|---|---|---|---|---|---|
V4/nt | 序列号 Sequence No. | V6/nt | 序列号 Sequence No. | V9/nt | 序列号 Sequence No. | ||||
YAASM0566 | C. aegerita | 云南 | 194 | HQ916212 | 157 | HQ916219 | 246 | HQ916226 | MG742437/MG742438 |
YAASM0567 | C. aegerita | 云南 | 194 | HQ916213 | 157 | HQ916220 | 246 | HQ916227 | MG742434/MG742439 |
YAASM0594 | C. aegerita | 云南 | 194 | HQ916214 | 157 | HQ916221 | 246 | HQ916228 | MG742435/MG742440 |
YAASM0625 | C. aegerita | 云南 | 194 | HQ916215 | 157 | HQ916222 | 246 | HQ916229 | MG742436/- |
YAASM1024 | C. aegerita | 云南 | 194 | HQ916216 | 157 | HQ916223 | 246 | HQ916230 | MG742433/MG742441 |
YAASM2135 | C. aegerita | 云南 | 193 | MF477939 | 157 | MF477941 | 246 | MF477943 | MG742432/MG737355 |
YAASM2136 | C. aegerita | 云南 | 193 | MF477940 | 157 | MF477942 | 246 | MF477944 | MG737353/MG737356 |
XW01 | C. aegerita | 云南 | 194 | HQ916217 | 157 | HQ916224 | 246 | HQ916231 | MG742459/MG737352 |
YUNCHA | C. aegerita | 云南 | 194 | MG737328 | 157 | MG737338 | 245 | MG737347 | MG737354/- |
CS45 | C. aegerita | 云南 | 195 | HQ916218 | 157 | HQ916225 | 246 | HQ916232 | MG742445/MG742457 |
AS-1 | C. aegerita | 江西 | 195 | MF461694 | 164 | MF461707 | 246 | MF461720 | MG742451/MG742458 |
AS-2 | C. aegerita | 江西 | 194 | MF461693 | 164 | MF461706 | 246 | MF461719 | MG742454/MG742455 |
CHA3 | C. aegerita | 江西 | 194 | MF461689 | 165 | MF461702 | 246 | MF461715 | MG742450/- |
C45 | C. aegerita | 江西 | 194 | MF461692 | 164 | MF461705 | 246 | MF461718 | -/MG742456 |
C89 | C. aegerita | 江西 | 194 | MF461691 | 164 | MF461704 | 246 | MF461717 | MG742447/- |
YAASM0473 | C. aegerita | 江西 | 194 | MG737329 | 164 | MG737336 | 246 | MG737346 | MG742449/ MG742453 |
YSD1H | C. aegerita | 江西 | 194 | MF461690 | 164 | MF461703 | 246 | MF461716 | MG742443/- |
CHA5 | C. aegerita | 江西 | 277 | MF461687 | 157 | MF461700 | 246 | MF461713 | MG737357/- |
YSG | C. aegerita | 江西 | 282 | MF461686 | 157 | MF461699 | 246 | MF461712 | MG737351/- |
BAICHA | C. aegerita | 江西 | 282 | MF461685 | 157 | MF461698 | 246 | MF461711 | MG737350/- |
AC0001 | C. aegerita | 福建 | 282 | MF461684 | 157 | MF461697 | 246 | MF461710 | MG742442/- |
AC0021 | C. aegerita | 福建 | 193 | MF461683 | 156 | MF461696 | 246 | MF461709 | MG742444/- |
AC0005 | C. aegerita | 福建 | 194 | MF461695 | 164 | MF461708 | 246 | MF461721 | MG742446/- |
AC0007 | C. aegerita | 福建 | 194 | MF461688 | 164 | MF461701 | 246 | MF461714 | MG742448/MG742460 |
CSJL | C. aegerita | 福建 | 195 | MG737327 | 164 | MG737337 | 246 | MG737345 | MG742452/MG742461 |
YAASM0711 | C. salicacola | 云南 | 170 | HQ916233 | 170 | HQ916249 | 221 | HQ916265 | MG742467/MG742478 |
YAASM0967 | C. salicacola | 云南 | 170 | HQ916238 | 170 | HQ916254 | 221 | HQ916270 | MG742462/MG742479 |
YAASM0971 | C. salicacola | 云南 | 170 | HQ916241 | 170 | HQ916257 | 221 | HQ916273 | MG742472/MG742469 |
YAASM0894 | C. salicacola | 云南 | 170 | HQ916234 | 170 | HQ916250 | 221 | HQ916266 | MG742465/MG742475 |
YAASM2120 | C. salicacola | 云南 | 170 | MG737321 | 170 | MG737330 | 221 | MG737343 | MG742464/MG742474 |
YAASM2544 | C. salicacola | 云南 | 170 | MG737322 | 170 | MG737331 | 221 | MG737339 | MG742466/- |
YAASM2595 | C. salicacola | 云南 | 170 | MG737323 | 170 | MG737332 | 220 | MG737340 | -/ MG742476 |
YAASM2722 | C. salicacola | 云南 | 170 | MG737324 | 170 | MG737333 | 221 | MG737341 | MG742470/MG742473 |
YAASM5262 | C. salicacola | 云南 | 170 | MG737325 | 170 | MG737334 | 220 | MG737342 | MG742468/MG742471 |
YAASMYXC | C. salicacola | 云南 | 170 | MG737326 | 170 | MG737335 | 221 | MG737344 | MG742463 /MG742477 |
Table 1 Strains and sequences used in this study
菌株 Strain | 种类 Species | 采集地 Collection site | 线粒体小亚基MtSSU rDNA variable domain sequence | Cbmr类型 Cbmr type Type-1/type-2 | |||||
---|---|---|---|---|---|---|---|---|---|
V4/nt | 序列号 Sequence No. | V6/nt | 序列号 Sequence No. | V9/nt | 序列号 Sequence No. | ||||
YAASM0566 | C. aegerita | 云南 | 194 | HQ916212 | 157 | HQ916219 | 246 | HQ916226 | MG742437/MG742438 |
YAASM0567 | C. aegerita | 云南 | 194 | HQ916213 | 157 | HQ916220 | 246 | HQ916227 | MG742434/MG742439 |
YAASM0594 | C. aegerita | 云南 | 194 | HQ916214 | 157 | HQ916221 | 246 | HQ916228 | MG742435/MG742440 |
YAASM0625 | C. aegerita | 云南 | 194 | HQ916215 | 157 | HQ916222 | 246 | HQ916229 | MG742436/- |
YAASM1024 | C. aegerita | 云南 | 194 | HQ916216 | 157 | HQ916223 | 246 | HQ916230 | MG742433/MG742441 |
YAASM2135 | C. aegerita | 云南 | 193 | MF477939 | 157 | MF477941 | 246 | MF477943 | MG742432/MG737355 |
YAASM2136 | C. aegerita | 云南 | 193 | MF477940 | 157 | MF477942 | 246 | MF477944 | MG737353/MG737356 |
XW01 | C. aegerita | 云南 | 194 | HQ916217 | 157 | HQ916224 | 246 | HQ916231 | MG742459/MG737352 |
YUNCHA | C. aegerita | 云南 | 194 | MG737328 | 157 | MG737338 | 245 | MG737347 | MG737354/- |
CS45 | C. aegerita | 云南 | 195 | HQ916218 | 157 | HQ916225 | 246 | HQ916232 | MG742445/MG742457 |
AS-1 | C. aegerita | 江西 | 195 | MF461694 | 164 | MF461707 | 246 | MF461720 | MG742451/MG742458 |
AS-2 | C. aegerita | 江西 | 194 | MF461693 | 164 | MF461706 | 246 | MF461719 | MG742454/MG742455 |
CHA3 | C. aegerita | 江西 | 194 | MF461689 | 165 | MF461702 | 246 | MF461715 | MG742450/- |
C45 | C. aegerita | 江西 | 194 | MF461692 | 164 | MF461705 | 246 | MF461718 | -/MG742456 |
C89 | C. aegerita | 江西 | 194 | MF461691 | 164 | MF461704 | 246 | MF461717 | MG742447/- |
YAASM0473 | C. aegerita | 江西 | 194 | MG737329 | 164 | MG737336 | 246 | MG737346 | MG742449/ MG742453 |
YSD1H | C. aegerita | 江西 | 194 | MF461690 | 164 | MF461703 | 246 | MF461716 | MG742443/- |
CHA5 | C. aegerita | 江西 | 277 | MF461687 | 157 | MF461700 | 246 | MF461713 | MG737357/- |
YSG | C. aegerita | 江西 | 282 | MF461686 | 157 | MF461699 | 246 | MF461712 | MG737351/- |
BAICHA | C. aegerita | 江西 | 282 | MF461685 | 157 | MF461698 | 246 | MF461711 | MG737350/- |
AC0001 | C. aegerita | 福建 | 282 | MF461684 | 157 | MF461697 | 246 | MF461710 | MG742442/- |
AC0021 | C. aegerita | 福建 | 193 | MF461683 | 156 | MF461696 | 246 | MF461709 | MG742444/- |
AC0005 | C. aegerita | 福建 | 194 | MF461695 | 164 | MF461708 | 246 | MF461721 | MG742446/- |
AC0007 | C. aegerita | 福建 | 194 | MF461688 | 164 | MF461701 | 246 | MF461714 | MG742448/MG742460 |
CSJL | C. aegerita | 福建 | 195 | MG737327 | 164 | MG737337 | 246 | MG737345 | MG742452/MG742461 |
YAASM0711 | C. salicacola | 云南 | 170 | HQ916233 | 170 | HQ916249 | 221 | HQ916265 | MG742467/MG742478 |
YAASM0967 | C. salicacola | 云南 | 170 | HQ916238 | 170 | HQ916254 | 221 | HQ916270 | MG742462/MG742479 |
YAASM0971 | C. salicacola | 云南 | 170 | HQ916241 | 170 | HQ916257 | 221 | HQ916273 | MG742472/MG742469 |
YAASM0894 | C. salicacola | 云南 | 170 | HQ916234 | 170 | HQ916250 | 221 | HQ916266 | MG742465/MG742475 |
YAASM2120 | C. salicacola | 云南 | 170 | MG737321 | 170 | MG737330 | 221 | MG737343 | MG742464/MG742474 |
YAASM2544 | C. salicacola | 云南 | 170 | MG737322 | 170 | MG737331 | 221 | MG737339 | MG742466/- |
YAASM2595 | C. salicacola | 云南 | 170 | MG737323 | 170 | MG737332 | 220 | MG737340 | -/ MG742476 |
YAASM2722 | C. salicacola | 云南 | 170 | MG737324 | 170 | MG737333 | 221 | MG737341 | MG742470/MG742473 |
YAASM5262 | C. salicacola | 云南 | 170 | MG737325 | 170 | MG737334 | 220 | MG737342 | MG742468/MG742471 |
YAASMYXC | C. salicacola | 云南 | 170 | MG737326 | 170 | MG737335 | 221 | MG737344 | MG742463 /MG742477 |
引物 Primer | 序列 Sequence(5'-3') | 用途 Function |
---|---|---|
Cs1f | CCTCCAACGCTATTTGCCTACG | 验证 M67菌株B交配位点 Verified the B mating locus of M67 |
Cs1r | GCACCACCATCCTCACTTCACC | |
Cs2f | CGGCGTGTTTTCGTTTTTCT | |
Cs2r | ATGGCGGAGCGGTAGTTCTT | |
Cs3f | TAGCCTGGAACACTGGAACT | |
Cs3r | GAATGGAGCGAGGAAATAGA | |
Cs4f | AGCAAGGCGACAGTGGAAGAT | |
Cs4r | CGAGTGACATGAGGCGGAAGT | |
Cs5f | ATTCGCCTTCATTTCCTTCAT | |
Cs5r | TCAGCGTTCTCCCATTCTCAC | |
Cs6f | CACGGTAGCAAAGCAGAATGA | |
Cs6r | AGGAGCGTAGAGAAAGCAGGA | |
Ysg1f | GCTGTGCTCCTCCAACTCTATT | 验证 M2菌株B交配位点 Verified the B mating locus of M2 |
Ysg1r | ACTTCTCGTCTGCCTTCTTCTC | |
Ysg2f | GTCTCGGTCTGCCCGTCTTGGA | |
Ysg2r | AGGTGGGATTAGGCCGTTTGCG | |
Ysg3f | CGACACCGACATCTTCTACTGC | |
Ysg3r | TCCCCCTCTTGTTTTCATCCTA | |
Ysg4f | TCCCATCTCCCACCCACGAATC | |
Ysg4r | CACACACCCCACCAACACCCAA | |
Ysg5f | ACGCAGAGATGGAGGTGTGTAT | |
Ysg5r | AGGAAATGATTGGTGAATGGAG | |
Ysg6f | TGGAGATAAGATAAAGCCTGGG | |
Ysg6r | ATGCGTGCGTGTAGTGTAGAAA | |
Cbmrf | CTTATCCCAACGAAGTCTTTACC | 扩增cbmr片段 |
Cbmrr | CTCTGCCTGACGAACAACAT | Amplified for cbmr fragment |
SPf | ATCTGCCTATCTGCTCGTCC | 扩增YUN-3和SE-1/2/3群体 |
SPr | ATGAGTCTGTTTTGCTGGGC | Amplified for groups of YUN-3 and SE-1/2/3 |
Table 2 Primers and sequences used in this study
引物 Primer | 序列 Sequence(5'-3') | 用途 Function |
---|---|---|
Cs1f | CCTCCAACGCTATTTGCCTACG | 验证 M67菌株B交配位点 Verified the B mating locus of M67 |
Cs1r | GCACCACCATCCTCACTTCACC | |
Cs2f | CGGCGTGTTTTCGTTTTTCT | |
Cs2r | ATGGCGGAGCGGTAGTTCTT | |
Cs3f | TAGCCTGGAACACTGGAACT | |
Cs3r | GAATGGAGCGAGGAAATAGA | |
Cs4f | AGCAAGGCGACAGTGGAAGAT | |
Cs4r | CGAGTGACATGAGGCGGAAGT | |
Cs5f | ATTCGCCTTCATTTCCTTCAT | |
Cs5r | TCAGCGTTCTCCCATTCTCAC | |
Cs6f | CACGGTAGCAAAGCAGAATGA | |
Cs6r | AGGAGCGTAGAGAAAGCAGGA | |
Ysg1f | GCTGTGCTCCTCCAACTCTATT | 验证 M2菌株B交配位点 Verified the B mating locus of M2 |
Ysg1r | ACTTCTCGTCTGCCTTCTTCTC | |
Ysg2f | GTCTCGGTCTGCCCGTCTTGGA | |
Ysg2r | AGGTGGGATTAGGCCGTTTGCG | |
Ysg3f | CGACACCGACATCTTCTACTGC | |
Ysg3r | TCCCCCTCTTGTTTTCATCCTA | |
Ysg4f | TCCCATCTCCCACCCACGAATC | |
Ysg4r | CACACACCCCACCAACACCCAA | |
Ysg5f | ACGCAGAGATGGAGGTGTGTAT | |
Ysg5r | AGGAAATGATTGGTGAATGGAG | |
Ysg6f | TGGAGATAAGATAAAGCCTGGG | |
Ysg6r | ATGCGTGCGTGTAGTGTAGAAA | |
Cbmrf | CTTATCCCAACGAAGTCTTTACC | 扩增cbmr片段 |
Cbmrr | CTCTGCCTGACGAACAACAT | Amplified for cbmr fragment |
SPf | ATCTGCCTATCTGCTCGTCC | 扩增YUN-3和SE-1/2/3群体 |
SPr | ATGAGTCTGTTTTGCTGGGC | Amplified for groups of YUN-3 and SE-1/2/3 |
Fig. 1 Characterization of B mating locus a, b:B mating locus of C. salicacola YAASM0711;c:B mating locus of M2;d:B mating locus of M67;e:comparison of sequence similarity
Fig.3 Neighbor-joining tree constructed by mtSSU V4-6-9 sequences SE:Strain groups from southwest of China;YSG:strain groups of YSG;YUN:strain groups from Yunnan;YS:strain groups of C. salicacola
Fig.4 Neighbor-joining tree constructed by cbmr sequences SE-1/2/3/4:Strain groups from southwest of China;YSG:strain groups of YSG;YUN-1/2/3:strain groups from Yunnan;YS-1/2/3:strain groups of C. salicacola
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