生物技术通报 ›› 2016, Vol. 32 ›› Issue (4): 203-209.doi: 10.13560/j.cnki.biotech.bull.1985.2016.04.027

• 研究报告 • 上一篇    下一篇

Pseudomonas plecoglossicida NyZ12基因无痕敲除方法的建立

毛灵琪,李存治,闫达中   

  1. 武汉轻工大学生物与制药工程学院,武汉 430023
  • 收稿日期:2015-08-25 出版日期:2016-04-25 发布日期:2016-04-26
  • 作者简介:毛灵琪,女,硕士研究生,研究方向:微生物学;E-mail:qzjsmlq@163.com
  • 基金资助:
    国家自然科学基金项目(31270112),微生物代谢国家重点实验室(上海交通大学)开放课题(MMLKF14-06)

A Method for Constructing Unmarked Deletion Mutants of Pseudomonas plecoglossicida NyZ12

MAO Ling-qi, LI Cun-zhi ,YAN Da-zhong   

  1. School of Biology and Pharmaceutical Engineering,Wuhan Polytechnic University,Wuhan 430023
  • Received:2015-08-25 Published:2016-04-25 Online:2016-04-26

摘要: 旨在建立一种适合环己胺降解菌NyZ12基因无痕敲除的可靠方法。通过overlapping PCR技术将目的基因上下游同源臂融合并克隆到自杀载体pEX18km上,将重组质粒转化到大肠杆菌S17 pir中,再通过接合转移到假单胞菌NyZ12菌株内,经pEX18km质粒上sacB基因的反向筛选得到突变株并通过PCR方法和测序鉴定。结果显示,成功构建了假单胞菌NyZ12菌株orf4637的基因突变株(NyZ12Δ4637)。通过自杀载体同源重组可以成功获得敲除的无痕突变株,且突变株基因组上没有任何抗性筛选标记残留,为环己胺降解菌NyZ12基因功能研究提供了可靠的基因敲除技术。

关键词: 基因敲除, 自杀载体, 同源重组, 结合转移

Abstract: This study aims to establish a practical method for an unmarked gene knockout of Pseudomonas plecoglossicida NyZ12 that degrades cyclohexylamine,which is significant for further studying the molecular mechanism of it degrading cyclohexylamine. The upstream and downstream flanking DNA fragments of the target gene were fused by overlapping PCR,and then cloned into the suicide vector pEx18km. The recombinant plasmid was introduced into Escherichia coli strain S17 pir and then transferred into NyZ12 by conjugation. The mutants by inverse screening sacB gene in pEx18km was identified by PCR and sequencing. The mutant NyZ12Δ4637 from NyZ12 strain orf4637 were successfully constructed. In conclusion,the unmarked gene-knockout mutant was acquired using homologous recombination of suicide vector,and there was no resistance residual of screening marker on the genome of the mutant. This study provides a reliable gene-knockout technology for investigating the genetic functions of NyZ12.

Key words: gene knockout, suicide vector, homologous recombination, conjugative transfer