生物技术通报 ›› 2023, Vol. 39 ›› Issue (9): 84-96.doi: 10.13560/j.cnki.biotech.bull.1985.2023-0149
程亚楠1(), 张文聪1, 周圆2, 孙雪1, 李玉1(), 李庆刚1()
收稿日期:
2023-02-22
出版日期:
2023-09-26
发布日期:
2023-10-24
通讯作者:
李庆刚,男,博士,教授,研究方向:应用微生物与酶工程;E-mail: liqinggang@tust.edu.cn;作者简介:
程亚楠,女,硕士研究生,研究方向:应用微生物与酶工程;E-mail: 379165649@qq.com
基金资助:
CHENG Ya-nan1(), ZHANG Wen-cong1, ZHOU Yuan2, SUN Xue1, LI Yu1(), LI Qing-gang1()
Received:
2023-02-22
Published:
2023-09-26
Online:
2023-10-24
摘要:
2'-岩藻糖基乳糖(2'-fucosyllactose, 2'-FL)是一种含量最丰富的人乳寡糖,微生物全细胞合成是生产2'-FL的重要方法。乳酸乳球菌(Lactococcus lactis)作为一种可直接用于乳制品的食品级微生物,目前还没有用于生产人乳寡糖的报道。首先,在两种常用L. lactis底盘NZ3900和NZ9000中利用含有基因fkp、futC、lacF的重组质粒pNZ8148-2f构建2'-FL补救合成途径,在添加10 g/L岩藻糖和5 g/L乳糖的发酵培养基中,测得2'-FL的摇瓶产量分别为0.16 g/L与0.4 g/L,结合对二者生长状况等综合分析,选取NZ9000作为优势底盘。然后,在NZ9000中构建2'-FL从头合成途径,利用同源重组技术并借助L. lactis中特有的敲除整合载体pNZ5319,在敲除非必需基因upp的同时将基因manA、manB、gmd和wcaG整合到染色体上,借助载体pNZ8148-1将基因manC、futC和lacF以质粒的形式引入到细胞中,同时利用不同启动子P32、Pnis对酶的表达水平进行组合调控。获得最优菌株NZ9000 6,在添加20 g/L葡萄糖和5 g/L乳糖的发酵培养基中,测得2'-FL的摇瓶产量为0.28 g/L。最后,在发酵培养基中对氯化高铁血红素、胰蛋白胨和酵母粉的浓度进行了优化,在添加2.5 μg/mL氯化高铁血红素、15 g/L胰蛋白胨、6 g/L酵母粉时2'-FL的摇瓶产量达到1.58 g/L,为相关报道的较高水平。该研究证实了L. lactis合成2'-FL的可行性,为2'-FL的生产提供了新思路。
程亚楠, 张文聪, 周圆, 孙雪, 李玉, 李庆刚. 乳酸乳球菌生产2'-岩藻糖基乳糖的途径构建及发酵培养基优化[J]. 生物技术通报, 2023, 39(9): 84-96.
CHENG Ya-nan, ZHANG Wen-cong, ZHOU Yuan, SUN Xue, LI Yu, LI Qing-gang. Synthetic Pathway Construction of Producing 2'-fucosyllactose by Lactococcus lactis and Optimization of Fermentation Medium[J]. Biotechnology Bulletin, 2023, 39(9): 84-96.
类别 Category | 名称 Name | 特性 Characteristic | 来源 Source |
---|---|---|---|
菌株 Strains | E. coli JM109 | Gene cloning | Lab stock |
E. coli MG1655 | Give genes manA, manB, gmd, wcaG | Lab stock | |
L. lactis NZ3900 | A strain of L. lactis | Lab stock | |
L. lactis NZ9000 | A strain of L. lactis | Lab stock | |
NZ3900(pNZ8148-1) | Cloning plasmid pNZ8148-1 into NZ3900 | This study | |
NZ9000(pNZ8148-1) | Cloning plasmid pNZ8148-1 into NZ9000 | This study | |
NZ3900(pNZ8148-2f) | Cloning plasmid pNZ8148-2f into NZ3900 | This study | |
NZ9000(pNZ8148-2f) | Cloning plasmid pNZ8148-2f into NZ9000 | This study | |
NZ9000 1 | Cloning P32, manB, manA, Pnis, gmd, wcaG into NZ9000 | This study | |
NZ9000 2 | Cloning Pnis, manB, manA, P32, gmd, wcaG into NZ9000 | This study | |
NZ9000 3 | Cloning P32, manB, manA, gmd, wcaG into NZ9000 | This study | |
NZ9000 4 | Cloning Pnis, manB, manA, gmd, wcaG into NZ9000 | This study | |
NZ9000 5 | Cloning plasmid pNZ8148-CfF1 into NZ9000 1 | This study | |
NZ9000 6 | Cloning plasmid pNZ8148-CfF2 into NZ9000 1 | This study | |
NZ9000 7 | Cloning plasmid pNZ8148-CfF1 into NZ9000 2 | This study | |
NZ9000 8 | Cloning plasmid pNZ8148-CfF2 into NZ9000 2 | This study | |
NZ9000 9 | Cloning plasmid pNZ8148-CfF1 into NZ9000 3 | This study | |
NZ9000 10 | Cloning plasmid pNZ8148-CfF2 into NZ9000 3 | This study | |
NZ9000 11 | Cloning plasmid pNZ8148-CfF1 into NZ9000 4 | This study | |
NZ9000 12 | Cloning plasmid pNZ8148-CfF2 into NZ9000 4 | This study | |
质粒 Plasmids | pNZ-fkp | Give gene fkp, GenBank accession NO:CP036555.1 | Lab stock |
pET-futC | Give gene futC, GenBank accession NO:CP000241.1 | Lab stock | |
pNZ8148-1 | Cmr, L.lactis expression vector, nisin controlled gene expression(NICE)system, food grade, 2 550 bp | This study | |
pNZ8148-2f | Cloning fkp, futC and lacF into pNZ8148-1 | This study | |
pNZ8148-CfF1 | Cloning manC, futC and lacF into pNZ8148-1 | This study | |
pNZ8148-CfF2 | Cloning manC, P32, futC and lacF into pNZ8148-1 | This study | |
pNZ5319 | Cmr, GenBank accession NO: DQ104847.1 | Lab stock | |
pNZ5319-UBAgwD1 | Cloning P32, manB, manA, Pnis, gmd and wcaG into pNZ5319 | This study | |
pNZ5319-UBAgwD2 | Cloning Pnis, manB, manA, P32, gmd and wcaG into pNZ5319 | This study | |
pNZ5319-UBAgwD3 | Cloning P32, manB, manA, gmd and wcaG into pNZ5319 | This study | |
pNZ5319-UBAgwD4 | Cloning Pnis, manB, manA, gmd and wcaG into pNZ5319 | This study | |
引物 Primers | 48-F | ataaaagaggagcaaagtaagcactcacccggggtact | |
48-R | gactcagcagcttctgcatataatttattttgtagttccttcgaac | ||
fkp-F1 | atgcagaagctgctgagtct | ||
fkp-R1 | ttagctacggctaacctgaa | ||
futC-F1 | ttcaggttagccgtagctaaatggcttttaaagtggtgca | ||
futC-R1 | gtcatctcttctctgttcacttaagcgttatacttttgggatttt | ||
lacF-F | gtgaacagagaagagatgactc | ||
lacF-R | ttactttgctcctcttttataaagttcg | ||
5319-F | cgccccatggtagaacttgcactatcaacacactcttaagt | ||
5319-R | atgagtcccagaccctccagtatcttaaaattttgtataataggaattg | ||
up-F | ggagggtctgggactcatcttttc | ||
up-R | tttgattttcctttcgctagatccctttgc | ||
down-F | gaaaaattcccttatttttgatatgac | ||
down-R | aagttctaccatggggcgataac | ||
manB-F | atgaaaaaattaacctgctttaaag | ||
manB-R | gcctcctaaatttttatcttactcgttcagcaacgtcag | ||
manA-F | aatttaggaggcatatcaaatgcaaaaactcattaactcag | ||
manA-R | ttacagcttgttgtaaacacg | ||
manA-R1 | atgagagcgacttttgacatttgatatgcctcctaattacagcttgttgtaaacacg | ||
gmd-F | aaatgtcaaaagtcgctctcat | ||
gmd-R | gcctcctaaatttttatcttatgactccagcgcgatcg | ||
wcag-F | aatttaggaggcatatcaaatgagtaaacaacgagtttttattg | ||
wcag-R | aaaaataagggaatttttcttacccccgaaagcggtcttg | ||
P32-F1 | ctagcgaaaggaaaatcaaaaattcggtcctcgggatatgataag | ||
P32-R1 | ctttaaagcaggttaattttttcatatttttatctacctagtata | ||
P32-F2 | gtgtttacaacaagctgtaaaattcggtcctcgggatatgataag | ||
P32-R2 | atgagagvgavttttgacatttgatatgcctcctaaatttttatctacctag | ||
Pnis-F1 | cgtgtttacaacaagctgtaactagtcttataactatactg | ||
Pnis-R1 | atgagagcgacttttgacatttgatatgcctcctaaataatttattttgtagttcc | ||
Pnis-F2 | agcgaaaggaaaatcaaatagtcttataactatactgaca | ||
Pnis-R2 | gcaggttaattttttcatataatttattttgtagttcc | ||
U-F | gataaaatcaaaacggctaaaatatc | ||
U-R | gcattaaacgttgaacttttttatggt | ||
pz-F | cgctacggacgggtgtaaatggcttttaaagtggtgca | ||
pz-R | gagtttcgactgcgccatataatttattttgtagttccttcg | ||
manC-F | atggcgcagtcgaaactc | ||
manC-R | ttacacccgtccgtagcg | ||
FP-F1 | tactaggtagataaaaatatggcttttaaagtggtgca | ||
FP-R1 | atcccgaggaccgaatttttacacccgtccgtagcg | ||
P32-F3 | aaattcggtcctcgggat | ||
P32-R3 | atttttatctacctagtatagcattt |
表1 实验所用菌株、质粒和引物
Table 1 Strains, plasmids and primers used in this study
类别 Category | 名称 Name | 特性 Characteristic | 来源 Source |
---|---|---|---|
菌株 Strains | E. coli JM109 | Gene cloning | Lab stock |
E. coli MG1655 | Give genes manA, manB, gmd, wcaG | Lab stock | |
L. lactis NZ3900 | A strain of L. lactis | Lab stock | |
L. lactis NZ9000 | A strain of L. lactis | Lab stock | |
NZ3900(pNZ8148-1) | Cloning plasmid pNZ8148-1 into NZ3900 | This study | |
NZ9000(pNZ8148-1) | Cloning plasmid pNZ8148-1 into NZ9000 | This study | |
NZ3900(pNZ8148-2f) | Cloning plasmid pNZ8148-2f into NZ3900 | This study | |
NZ9000(pNZ8148-2f) | Cloning plasmid pNZ8148-2f into NZ9000 | This study | |
NZ9000 1 | Cloning P32, manB, manA, Pnis, gmd, wcaG into NZ9000 | This study | |
NZ9000 2 | Cloning Pnis, manB, manA, P32, gmd, wcaG into NZ9000 | This study | |
NZ9000 3 | Cloning P32, manB, manA, gmd, wcaG into NZ9000 | This study | |
NZ9000 4 | Cloning Pnis, manB, manA, gmd, wcaG into NZ9000 | This study | |
NZ9000 5 | Cloning plasmid pNZ8148-CfF1 into NZ9000 1 | This study | |
NZ9000 6 | Cloning plasmid pNZ8148-CfF2 into NZ9000 1 | This study | |
NZ9000 7 | Cloning plasmid pNZ8148-CfF1 into NZ9000 2 | This study | |
NZ9000 8 | Cloning plasmid pNZ8148-CfF2 into NZ9000 2 | This study | |
NZ9000 9 | Cloning plasmid pNZ8148-CfF1 into NZ9000 3 | This study | |
NZ9000 10 | Cloning plasmid pNZ8148-CfF2 into NZ9000 3 | This study | |
NZ9000 11 | Cloning plasmid pNZ8148-CfF1 into NZ9000 4 | This study | |
NZ9000 12 | Cloning plasmid pNZ8148-CfF2 into NZ9000 4 | This study | |
质粒 Plasmids | pNZ-fkp | Give gene fkp, GenBank accession NO:CP036555.1 | Lab stock |
pET-futC | Give gene futC, GenBank accession NO:CP000241.1 | Lab stock | |
pNZ8148-1 | Cmr, L.lactis expression vector, nisin controlled gene expression(NICE)system, food grade, 2 550 bp | This study | |
pNZ8148-2f | Cloning fkp, futC and lacF into pNZ8148-1 | This study | |
pNZ8148-CfF1 | Cloning manC, futC and lacF into pNZ8148-1 | This study | |
pNZ8148-CfF2 | Cloning manC, P32, futC and lacF into pNZ8148-1 | This study | |
pNZ5319 | Cmr, GenBank accession NO: DQ104847.1 | Lab stock | |
pNZ5319-UBAgwD1 | Cloning P32, manB, manA, Pnis, gmd and wcaG into pNZ5319 | This study | |
pNZ5319-UBAgwD2 | Cloning Pnis, manB, manA, P32, gmd and wcaG into pNZ5319 | This study | |
pNZ5319-UBAgwD3 | Cloning P32, manB, manA, gmd and wcaG into pNZ5319 | This study | |
pNZ5319-UBAgwD4 | Cloning Pnis, manB, manA, gmd and wcaG into pNZ5319 | This study | |
引物 Primers | 48-F | ataaaagaggagcaaagtaagcactcacccggggtact | |
48-R | gactcagcagcttctgcatataatttattttgtagttccttcgaac | ||
fkp-F1 | atgcagaagctgctgagtct | ||
fkp-R1 | ttagctacggctaacctgaa | ||
futC-F1 | ttcaggttagccgtagctaaatggcttttaaagtggtgca | ||
futC-R1 | gtcatctcttctctgttcacttaagcgttatacttttgggatttt | ||
lacF-F | gtgaacagagaagagatgactc | ||
lacF-R | ttactttgctcctcttttataaagttcg | ||
5319-F | cgccccatggtagaacttgcactatcaacacactcttaagt | ||
5319-R | atgagtcccagaccctccagtatcttaaaattttgtataataggaattg | ||
up-F | ggagggtctgggactcatcttttc | ||
up-R | tttgattttcctttcgctagatccctttgc | ||
down-F | gaaaaattcccttatttttgatatgac | ||
down-R | aagttctaccatggggcgataac | ||
manB-F | atgaaaaaattaacctgctttaaag | ||
manB-R | gcctcctaaatttttatcttactcgttcagcaacgtcag | ||
manA-F | aatttaggaggcatatcaaatgcaaaaactcattaactcag | ||
manA-R | ttacagcttgttgtaaacacg | ||
manA-R1 | atgagagcgacttttgacatttgatatgcctcctaattacagcttgttgtaaacacg | ||
gmd-F | aaatgtcaaaagtcgctctcat | ||
gmd-R | gcctcctaaatttttatcttatgactccagcgcgatcg | ||
wcag-F | aatttaggaggcatatcaaatgagtaaacaacgagtttttattg | ||
wcag-R | aaaaataagggaatttttcttacccccgaaagcggtcttg | ||
P32-F1 | ctagcgaaaggaaaatcaaaaattcggtcctcgggatatgataag | ||
P32-R1 | ctttaaagcaggttaattttttcatatttttatctacctagtata | ||
P32-F2 | gtgtttacaacaagctgtaaaattcggtcctcgggatatgataag | ||
P32-R2 | atgagagvgavttttgacatttgatatgcctcctaaatttttatctacctag | ||
Pnis-F1 | cgtgtttacaacaagctgtaactagtcttataactatactg | ||
Pnis-R1 | atgagagcgacttttgacatttgatatgcctcctaaataatttattttgtagttcc | ||
Pnis-F2 | agcgaaaggaaaatcaaatagtcttataactatactgaca | ||
Pnis-R2 | gcaggttaattttttcatataatttattttgtagttcc | ||
U-F | gataaaatcaaaacggctaaaatatc | ||
U-R | gcattaaacgttgaacttttttatggt | ||
pz-F | cgctacggacgggtgtaaatggcttttaaagtggtgca | ||
pz-R | gagtttcgactgcgccatataatttattttgtagttccttcg | ||
manC-F | atggcgcagtcgaaactc | ||
manC-R | ttacacccgtccgtagcg | ||
FP-F1 | tactaggtagataaaaatatggcttttaaagtggtgca | ||
FP-R1 | atcccgaggaccgaatttttacacccgtccgtagcg | ||
P32-F3 | aaattcggtcctcgggat | ||
P32-R3 | atttttatctacctagtatagcattt |
图2 2'-FL从头合成途径所需质粒的构建流程 A:表达途径基因所用质粒的构建流程;B:基因重组所用质粒的构建流程;序号表示各片段和质粒的构建步骤
Fig. 2 Construction of plasmids required for the de novo synthesis of 2'-FL A: Construction process of the plasmids expressing pathway genes. B: Construction process of plasmids for gene recombination. The number indicates the construction steps of each fragment and plasmid
胰蛋白胨 Tryptone/(g·L-1) | 酵母粉 Yeast extract/(g·L-1) | |||
---|---|---|---|---|
5 | 6 | 8 | 10 | 12 |
10 | 5 | 7 | 9 | 11 |
15 | 4 | 6 | 8 | 10 |
20 | 3 | 5 | 7 | 9 |
表2 胰蛋白胨与酵母粉协同优化浓度组合
Table 2 Co-optimized concentration combination of tryptone and yeast extract
胰蛋白胨 Tryptone/(g·L-1) | 酵母粉 Yeast extract/(g·L-1) | |||
---|---|---|---|---|
5 | 6 | 8 | 10 | 12 |
10 | 5 | 7 | 9 | 11 |
15 | 4 | 6 | 8 | 10 |
20 | 3 | 5 | 7 | 9 |
图3 验证菌株的菌落PCR电泳图 A:质粒pNZ8148-2f验证;B:质粒pNZ5319-UBAgwD1验证;C:菌株NZ9000 1单交换验证;D:菌株NZ9000 1双交换验证;E:质粒pNZ8148-CfF1验证;M:Trans 1 K DNA marker。图中标出了较亮的主要条带大小
Fig. 3 Electrophoresis diagram of PCR product for strain validation A: Verification of plasmids pNZ8148-2f. B: Verification of plasmid pNZ5319-UBAgwD1. C: Strain NZ9000 1 was verified by single crossover. D: Strain NZ9000 1 was verified by double crossover. E: Verification of plasmid pNZ8148-CfF1. M: Trans 1 K DNA marker. The sizes of the main bands were signed
图5 带有从头合成途径菌株的2'-FL产量和生长曲线 A:菌株发酵48 h后的2'-FL产量,1:NZ9000 5;2:NZ9000 7;3:NZ9000 9;4:NZ9000 11;5:NZ9000 6;6:NZ9000 8;7:NZ9000 10;8:NZ9000 12;B:菌株的生长曲线
Fig. 5 Productions and growth curves of different strains with 2'-FL de novo synthesis pathway A: The 2'-FL production of different strains after 48 h fermentation. 1: NZ9000 5;2: NZ9000 7; 3: NZ9000 9; 4: NZ9000 11; 5: NZ9000 6; 6: NZ9000 8;7: NZ9000 10; 8: NZ9000 12. B: The growth curve of different strains
图7 胰蛋白胨和酵母粉浓度对菌株生长和2'-FL生产的影响 1-16序号代表不同胰蛋白胨和酵母粉浓度组合;1-4:胰蛋白胨5 g/L条件下,酵母粉依次为6、8、10和12 g/L;5-8:胰蛋白胨10 g/L条件下,酵母粉依次为5、7、9和11 g/L;9-12:胰蛋白胨15 g/L条件下,酵母粉依次为4、6、8和10 g/L;13-16:胰蛋白胨20 g/L条件下,酵母粉依次为3、5、7和9 g/L
Fig. 7 Effects of tryptone and yeast extract concentration on cell growth and 2'-FL production Number 1-16 represent the cultures with different tryptone and yeast concentration. 1-4: Tryptone set as 5 g/L, yeast extract varied: 6, 8, 10 and 12 g/L. 5-8: Tryptone set as 10 g/L, yeast extract varied: 5, 7, 9 and 11 g/L. 9-12: Tryptone set as 15 g/L, yeast extract varied: 4, 6, 8 and 10 g/L. 13-16: Tryptone set as 20 g/L, yeast extract varied: 3, 5, 7 and 9 g/L
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