生物技术通报 ›› 2024, Vol. 40 ›› Issue (5): 167-178.doi: 10.13560/j.cnki.biotech.bull.1985.2023-1092

• 研究报告 • 上一篇    下一篇

猕猴桃AcHSP20基因家族的鉴定及表达分析

侯雅琼1(), 郎红珊1, 闻蒙蒙1, 谷易云2, 朱润洁2, 汤晓丽1()   

  1. 1.鲁东大学农林工程研究院 山东省高校作物高产抗逆分子模块育种重点实验室,烟台 264025
    2.鲁东大学农学院,烟台 264025
  • 收稿日期:2023-11-20 出版日期:2024-05-26 发布日期:2024-06-13
  • 通讯作者: 汤晓丽,女,博士,副教授,研究方向:果树生理和逆境分子生物学;E-mail: tangxiaoli.1@163.com
  • 作者简介:侯雅琼,女,硕士研究生,研究方向:园艺植物分子模块育种;E-mail: houyaqiong2023@163.com
  • 基金资助:
    国家自然科学基金青年基金项目(31901987);山东省自然科学基金面上项目(ZR2023MC200)

Identification and Expression Analysis of AcHSP20 Gene Family in Kiwifruit

HOU Ya-qiong1(), LANG Hong-shan1, WEN Meng-meng1, GU Yi-yun2, ZHU Run-jie2, TANG Xiao-li1()   

  1. 1. The Engineering Research Institute of Agriculture and Forestry, Ludong University, Key Laboratory of Molecular Module-Based Breeding of High Yield and Abiotic Resistant Plants in Universities of Shandong, Yantai 264025
    2. College of Agriculture, Ludong University, Yantai 264025
  • Received:2023-11-20 Published:2024-05-26 Online:2024-06-13

摘要:

目的】鉴定分析了猕猴桃的小热休克蛋白(HSP20s/sHSPs)基因家族,为猕猴桃AcHSP20基因的生物学功能研究和猕猴桃的抗性育种奠定基础。【方法】基于猕猴桃全基因组数据,利用生物信息学方法对猕猴桃AcHSP20基因家族进行鉴定,并分析了家族成员的理化性质、系统进化、染色体定位、基因结构、亚细胞定位及启动子。同时利用荧光定量PCR技术分析了猕猴桃AcHSP20基因在非生物胁迫和激素处理后的表达变化情况。【结果】鉴定获得34个AcHSP20基因家族成员。其编码蛋白的氨基酸数目为85-371,分子量介于9.93-40.18 kD,等电点介于4.4-9.3,AcHSP20s多定位于细胞质和叶绿体。34个基因分布在17条染色体上,多数没有或只有一个内含子。基因的启动子含有植物激素和非生物胁迫响应元件。所有测定的AcHSP20基因在猕猴桃的根茎叶中均有表达且在高温及其他多种非生物胁迫和植物激素处理下差异表达显著。【结论AcHSP20基因家族成员在猕猴桃的高温、ABA、MeJA、NaCl等逆境胁迫响应中发挥重要作用。

关键词: 猕猴桃, AcHSP20基因家族, 基因特征, 生物信息学

Abstract:

Objective】The identification and analyses of heat shock proteins(HSP20s/sHSPs)in kiwifruit would lay foundation for the functional studies of AcHSP20 genes and resistance breeding of kiwifruit. 【Method】Based on the genome-wide data of kiwifruit, the AcHSP20 gene family was identified, and the physicochemical properties, phyletic evolution, chromosome distribution, gene structure, subcellular localization as well as promoters were analyzed by bioinformatics. 【Result】The 34 members of AcHSP20 gene family were identified. They encoded proteins with 85-371 amino acids, 9.93-40.18 kD molecular weight(Mw)and 4.4-9.3 isoelectric points(pI). Meanwhile, most AcHSP20 proteins were predicted to be located in cytoplasm and chloroplast. The 34 AcHSP20 genes were distributed on 17 chromosomes, and there were no or only one intron, mostly. Promoters of AcHSP20 genes had phytohormone and abiotic stress response elements. All the detected AcHSP20 genes expressed ubiquitously in the roots, stems and leaves of kiwifruit and the expressions changed significantly under abiotic stresses and phytohormone treatments. 【Conclusion】The AcHSP20 gene family plays important roles in high temperature, ABA, MeJA, NaCl stress responses in kiwifruit.

Key words: kiwifruit, AcHSP20 gene family, gene characterization, bioinformatics