Progress in the Study of Environmental Microbes by Metagenomic Methods

doi:10.13560/j.cnki.biotech.bull.1985.2015.11.001

Abstract

Abstract: With the development of Next Generation Sequencing Technology(NGS), metagenomics has become a significant strategy to understand the structures of environmental microbial community and their interactions. Metagenomics analyzes the environmental microbes as a whole rather than extracting the individuals for culture and thus it can avoid the troubles of conventional culturing progress and bypass the accompanying difficulties. Due to this advantage, several sequencing projects of environmental microbes on human, ocean, soil etc. have been launched and largely promoted the progress on metagenomic studies. In this review, we will discuss both the merits and restrictions of current methods and pipelines adopted in the analysis on metagenomic data and introduce the progress brought by their applications in the researches of various environmental samples.

Key words: metagenomics, high-throughput sequencing, bioinformatics, environmental microbe

Liu Jiemeng, Qi Ji. Progress in the Study of Environmental Microbes by Metagenomic Methods[J]. Biotechnology Bulletin, 2015, 31(11): 51-59.

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