生物技术通报 ›› 2019, Vol. 35 ›› Issue (3): 103-109.doi: 10.13560/j.cnki.biotech.bull.1985.2018-0848

• 研究报告 • 上一篇    下一篇

巴洛沙星胁迫下大肠杆菌的比较蛋白质组学研究

张良, 陈小青, 宋佳宇, 毛然然, 姜倩雯, 林向民   

  1. 1. 福建农林大学生命科学学院,福州 350002;
    2. 福建农林大学福建省农业生态过程与安全监控重点实验室,福州 350002
  • 收稿日期:2018-09-30 出版日期:2019-03-26 发布日期:2019-04-03
  • 作者简介:张良,男,研究方向:微生物蛋白质组学;E-mail:199620916@qq.com;陈小青同为本文第一作者
  • 基金资助:
    2018年国家级大学生创新创业训练计划项目(201810389040)

Comparative Proteomics Analysis of Escherichia coli in Response to Barofloxacin Stress

ZHANG Liang, CHEN Xiao-qing, SONG Jia-yu, MAO Ran-ran, JIANG Qian-wen, LIN Xiang-min   

  1. 1. School of Life Sciences,Fujian Agriculture and Forestry University,Fuzhou 350002;
    2. Fujian Provincial Key Laboratory of Agroecological Processing and Safety Monitoring,Fujian Agriculture and Forestry University,Fuzhou 350002
  • Received:2018-09-30 Published:2019-03-26 Online:2019-04-03

摘要: 随着全球细菌耐药形势的日益严峻,细菌耐药机制已成为热点内容。利用iTRAQ标记的定量蛋白质组学方法,比较大肠杆菌K12 BW25113菌株在1/4 MIC巴洛沙星浓度胁迫下蛋白表达的差异。结果表明,质谱分析法共鉴定到118个差异蛋白,其中52个蛋白表达上升,66个表达下降;经生物信息学分析发现,细菌可能通过降低TCA循环、丙酮酸循环以及碳代谢等能量代谢来调整细菌的耐药状态;并通过提高核酸代谢等相关蛋白表达,减少巴洛沙星的杀菌压力,促进细菌存活。同时,利用qPCR技术验证碳代谢和嘧啶代谢途径的相关基因在mRNA水平的表达变化,表明大部分基因转录水平表达变化与蛋白水平一致。以上结果为深入研究细菌的耐药过程提供了理论依据,也为更好地控制和防治耐药细菌提供了药物作用靶点。

关键词: 大肠杆菌, 巴洛沙星, 应激耐药, 定量蛋白质组学

Abstract: With the increasingly severe situation of bacterial drug resistance in the world,bacterial drug-resistant mechanism has become a hot topic. An iTRAQ-labeling-based quantitative proteomics method was performed to compare the differential expression of Escherichia coli K12 BW25113 in response to 1/4MIC balofloxacin stress. The result showed that a total of 118 differential proteins with 66 down-regulated and 52 up-regulated ones were identified. Bioinformatics analysis further showed that bacterial drug-resistances were regulated by altering some energy metabolism such as reducing TCA cycle,pyruvate cycle,and carbon,and bacterial survival increased by rising the expressions of proteins related to nucleic acid metabolism and then eliminating the stresses from blofloxacin. Meanwhile,the qPCR method was used to validate the differential expressions of genes related to the carbon metabolism and pyrimidine metabolism;consequently,most of the transcription levels of these genes were consistent with their protein levels. These findings provide the theoretical basis for further investigating the bacterial drug resistance process and action targets for better controlling and treating drug-resistant bacteria.

Key words: Escherichia coli, blofloxacin, stress resistance, quantitative proteomics