生物技术通报 ›› 2026, Vol. 42 ›› Issue (7): 1-13.doi: 10.13560/j.cnki.biotech.bull.1985.2025-0964

• 研究报告 •    

鼠源罗伊氏黏液乳杆菌的分离鉴定及全基因组测序分析

高飞, 张宇曦, 穆頔, 陈峥, 陈洪艳()   

  1. 1.齐齐哈尔大学生命科学与农林学院,齐齐哈尔 161006
    2.黑龙江省农业微生物制剂产业化工程技术研究中心,齐齐哈尔 161006
    3.黑龙江省农用生物制剂产业化协同创新中心,齐齐哈尔 161006
    4.黑龙江省高浓度有机废液生物转化及产业化概念验证中心,齐齐哈尔 161006
  • 收稿日期:2025-09-09 出版日期:2026-02-09 发布日期:2026-02-09
  • 通讯作者: 陈洪艳03692@qqhru.edu.cn
  • 基金资助:
    黑龙江省省属本科高校优秀青年教师基础研究支持计划(YQJH2024273);齐齐哈尔大学研究生创新科研项目(QUZLTS-CX2024018)

Isolation, Identification, and Whole-genome Sequencing Analysis of Murine-Derived Limosilactobacillus reuteri

GAO Fei, ZHANG Yu-xi, MU Di, CHEN Zheng, CHEN Hong-yan()   

  1. 1.College of Life Science and Agriculture Forestry, Qiqihar University, Qiqihar 161006
    2.Heilongjiang Provincial Engineering Technology Research Center for Industrialization of Agricultural Microbial Preparations, Qiqihar 161006
    3.Heilongjiang Provincial Collaborative Innovation Center of Agrobiological Preparation Industrialization, Qiqihar 161006
    4.Heilongiiang Provincial Concept Verification Center of High Concentration Organic Waste Liquid Biotransformation and Industrialization, Qiqihar 161006
  • Received:2025-09-09 Published:2026-02-09 Online:2026-02-09

摘要:

目的 罗伊氏粘液乳杆菌(Limosilactobacillus reuteri)是一种兼性厌氧的乳酸菌,常见于脊椎动物及哺乳动物的肠道内。该菌具有降胆固醇、抑制病原菌生长和增强机体免疫力等多种益生功能,因此分离可广泛应用于食品发酵工业中的菌种至关重要。 方法 利用MRS-CaCO3培养基从小鼠粪便中分离并培养L. reuteri,通过形态学观察、革兰染色、16S rRNA序列分析进行初步鉴定,对符合菌株进行生长性能、抗逆性能、抑菌功效测定,并对菌株进行全基因组测序注释,从基因层面探究其益生机制和安全性。 结果 分离得到的L. reuteri GF304无溶血性,具有良好的生长性能和产酸能力;对酸和胆盐具有较强的耐受性,在人工肠胃液中存活率较高;能有效抑制大肠杆菌、金黄色葡萄球菌的生长,表明其益生特性。全基因组测序分析结果显示,L. reuteri GF304基因组中不存在毒力和耐药基因,且含有耐热胁迫、耐冷胁迫、耐酸、耐胆盐、黏附、抗氧化和有机酸合成相关的抗应激和益生基因。菌株GF304最普遍的CAZy分类为GH、GT。次级代谢产物分析发现菌株GF304具有Type Ⅲ Polyketide Synthase合成基因簇与RiPP合成基因簇。 结论 基于安全的基因组背景(无毒力/耐药基因)和丰富的益生基因簇,结合其优异的生长、抗逆与抑菌性能,L. reuteri GF304 展现出作为益生菌制剂的巨大开发潜力。

关键词: 罗伊氏黏液乳杆菌, 分离鉴定, 益生特性, 全基因组测序

Abstract:

Objective Limosilactobacillus reuteri is a facultative anaerobic lactic acid bacterium commonly found in the intestines of vertebrates and mammals. This bacterium possesses various probiotic functions, such as cholesterol reduction, inhibition of pathogenic bacteria growth, and enhancement of immune function, making the isolation of strains highly applicable to the food fermentation industry crucial. Method In this study, MRS-CaCO₃ medium was used to isolate and cultivate L. reuteri from mouse feces. Preliminary identification was conducted through morphological observation, Gram staining, and 16S rRNA sequence analysis. The identified strains were subjected to growth performance, stress resistance, and antibacterial efficacy tests. Whole-genome sequencing and annotation were performed to explore the probiotic mechanisms and safety of the strain at the genetic level. Result The isolated L. reuteri GF304 had no hemolytic activity and demonstrated promising growth performance. It showed strong tolerances to acid and bile salts, with high survival rates in artificial gastrointestinal fluids. Additionally, it effectively inhibited the growth of Escherichia coli and Staphylococcus aureus, indicating its probiotic properties. Whole-genome sequencing analysis revealed that the genome of L. reuteri GF304 contained no virulence or antibiotic resistance genes. Instead, it harbored stress resistance and probiotic genes related to heat shock tolerance, cold shock tolerance, acid resistance, bile salt tolerance, adhesion, antioxidant capacity, and organic acid synthesis. The most prevalent CAZy classifications for strain GF304 were GH and GT. Secondary metabolite analysis revealed that strain GF304 possesses Type Ⅲ Polyketide Synthase biosynthetic gene clusters and RiPP biosynthetic gene clusters. Conclusion Based on its secure genomic profile (absence of virulence and antibiotic resistance genes) and the abundance of probiotic-associated gene clusters, combined with its excellent growth, stress tolerance, and antibacterial properties, L. reuteri GF304 demonstrates significant potential for development as a probiotic preparation.

Key words: Limosilactobacillus reuteri, isolation and identification, probiotic properties, whole-genome sequencing