Biotechnology Bulletin ›› 2022, Vol. 38 ›› Issue (2): 113-122.doi: 10.13560/j.cnki.biotech.bull.1985.2021-0243
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MA Qing-yun1,2(), JIANG Xu1, LI Qing-qing1,2, SONG Jin-long3, ZHOU Yi-qing1, RUAN Zhi-yong1,4,5()
Received:
2021-03-03
Online:
2022-02-26
Published:
2022-03-09
Contact:
RUAN Zhi-yong
E-mail:1065178170@qq.com;ruanzhiyong@caas.cn
MA Qing-yun, JIANG Xu, LI Qing-qing, SONG Jin-long, ZHOU Yi-qing, RUAN Zhi-yong. Isolation and Identification of Nicosulfuron Degrading Strain Chryseobacterium sp. LAM-M5 and Study on Its Degradation Pathway[J]. Biotechnology Bulletin, 2022, 38(2): 113-122.
Fig.4 Effects of different pH(A),temperature(B)and initial inoculum ratio(C)on the degradation of nicosulfuron by strain LAM-M5 The error line in the figurebars refers to standard errors. The same below
基因组组分 Characteristics | 菌株LAM-M5 Chryseobacterium lacus LAM-M5 |
---|---|
Genome size/bp | 6 311 696 |
Gene number | 6 366 |
Gene length/bp | 5 704 104 |
GC content/% | 43.84 |
genes of genome/% | 90.37 |
Gene average length/bp | 896 |
Gene internal length/bp | 607 592 |
Gene internal GC content/% | 36.52 |
Internal of genome/% | 9.63 |
Table 1 Genomic characteristics of strain LAM-M5
基因组组分 Characteristics | 菌株LAM-M5 Chryseobacterium lacus LAM-M5 |
---|---|
Genome size/bp | 6 311 696 |
Gene number | 6 366 |
Gene length/bp | 5 704 104 |
GC content/% | 43.84 |
genes of genome/% | 90.37 |
Gene average length/bp | 896 |
Gene internal length/bp | 607 592 |
Gene internal GC content/% | 36.52 |
Internal of genome/% | 9.63 |
编号 No. | 预测的降解酶基因 Predicted degeration genes | 大小 Size/bp |
---|---|---|
1 | Putative phosphoesterase | 172 |
2 | Acyl-CoA thioesterase YneP | 264 |
3 | Carboxylesterase | 254 |
4 | Catalase X | 535 |
5 | Probable manganese catalase | 274 |
6 | Hydrolase YhcX | 513 |
7 | Putative sporulation hydrolase CotR | 317 |
Table 2 7 genes related to degradation enzymes in the genome of strain LAM-M5
编号 No. | 预测的降解酶基因 Predicted degeration genes | 大小 Size/bp |
---|---|---|
1 | Putative phosphoesterase | 172 |
2 | Acyl-CoA thioesterase YneP | 264 |
3 | Carboxylesterase | 254 |
4 | Catalase X | 535 |
5 | Probable manganese catalase | 274 |
6 | Hydrolase YhcX | 513 |
7 | Putative sporulation hydrolase CotR | 317 |
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