Biotechnology Bulletin ›› 2017, Vol. 33 ›› Issue (3): 162-168.doi: 10.13560/j.cnki.biotech.bull.1985.2017.03.023

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Characteristics of Gene CDH5 in Schizothorax prenanti and Its Response to Aeromomas sobria Infection

DUAN Hui-qin1, WANG Li2   

  1. 1. Institute of Qinghai-Tibet Plateau,Southwest University for Nationalities,Chengdu 610041;
    2.College of Life Science and Technology,Southwest University for Nationalities,Chengdu 610041
  • Received:2016-07-10 Online:2017-03-26 Published:2017-03-07

Abstract: This work is to characterize cadherin 5(CDH5)gene of Schizothorax prenanti. Bioinformatics tools were used to analyze the gene sequence of CDH5,and real-time PCR to detect the expression variation of CDH5 gene at 0 h,24 h,and 48 h of S. prenanti infected with Aeromomas sobria. The full-length cDNA of CDH5 was 4 825 bp,ORF was 2 313 bp,and encoded 770 amino acids. Its molecular weight was 85.19 kD and pI was 5.01. The CDH5 protein had a signal peptide sequence,and its secondary structure was mainly composed of random coil,extend strand,and α-helix. Multiple alignment analysis revealed that CDH5 shared 74% homology with Danio rerio,low similarity with Homo sapiens(43%). CDH5 were expressed in all detected tissues after A. sobria infection,the expression of CDH5 in spleen at 24 h was significantly higher than at 0 h and 48 h(P < 0.05),also the expression of CDH5 in the liver,kidney,and muscle at 48 h higher than at 24 h(P < 0.05),and significantly higher expression of CDH5 at 48 h in heart and intestines than at 0 h(P < 0.05). It indicated that CDH5 of S. prenanti might be involved in immune response to A. sobria infection,laying a foundation for the further study on the functions of S. prenanti.

Key words: CDH5, Schizothorax prenanti, tissue expression, Aeromomas sobria