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    26 November 2021, Volume 37 Issue 11
    Biotechnological Research on Edible Mushrooms Has Come a Long Way
    HUANG Chen-yang
    2021, 37(11):  1-3. 
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    Research Progress in CRISPR/Cas9 Genome Editing System in Edible and Medicinal Fungi
    LIU Xiao-tian, QIU Hao, TIAN Li, REN Ang, ZHAO Ming-wen
    2021, 37(11):  4-13.  doi:10.13560/j.cnki.biotech.bull.1985.2021-1055
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    CRISPR/Cas9 is currently the most successful precise genome editing technology. So far,there have been relevant application reports in at least nine edible and medicinal fungi,including Pleurotus eryngii,Pleurotus ostreatus,Agaricus bisporus,Ganoderma lucidum,Schizophyllum commune,Coprinopsis cinerea,Flammulina velutipes,Cordyceps militaris and Shiraia bambusicola. This article briefly describes the mechanism and delivery strategies of the CRISPR/Cas9 system,and proposes solutions for the application in edible and medicinal fungi. Last but not least,referring to the current frontier development of CRISPR technology,such as multiplex gene editing, base editing, prime editing and transcription regulation, etc., we give certain enlightenment to the future application prospects in the field of edible and medicinal fungi.

    Research Progress in Chemical Constituents of Taiwanofungus camphoratum and Its Pharmacological Activities
    LI Jing, FENG Na, WANG Sheng-yang, LIN Zhan-xi
    2021, 37(11):  14-31.  doi:10.13560/j.cnki.biotech.bull.1985.2021-1052
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    In recent years,Taiwanofungus camphoratum has been widely concerned for its rare resources and unique pharmacological efficacy. It contains a lot of triterpenoids,polysaccharides and other functional components in T. camphoratum fruiting body,mycelium and fermentation broth,and there are published reports on some of chemical constituents have many pharmacological effects such as anti-cancer,anti-oxidant,anti-inflammatory and so on. This paper comprehensively sorted the publicly reported main compounds,biological and chemical synthesis and their pharmacological effects,and proposed the expectations and indicated the direction for the development of T. camphoratum industry,aiming to provide a scientific references for the study,development,and application of T. camphoratum,to increase the commercialization and market value of T. camphoratum and to enhance the development of T. camphoratum in China and all over the world.

    Research Status and Industrial Application of Fungal Melanin
    XUE Fan-zheng, HUANG Hai-chen, WU Fu-quan, LI Xiao-min, WU Xiao-ping, FU Jun-sheng
    2021, 37(11):  32-41.  doi:10.13560/j.cnki.biotech.bull.1985.2021-0562
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    Natural melanin is a polyhydroxyindole or polyhydroxyphenol polymer synthesized and secreted by biological cells,which is soluble in alkali but insoluble in water and other organic solvents,and is widely found in various animals,plants and microorganisms. Current researches have shown that there are a variety of biological activities in natural fungal melanin,and it is an important biological material and resource with a wide range of applications in many fields. This paper reviews the current status of research on the classification,structure,synthesis pathway,physicochemical properties and biological activities of fungal melanin,and points out that fungal melanin has great potential and value in production applications. Furthermore,by comprehensively comparing four fungal melanin preparation methods,including extraction by leaching,ultrasonic-assisted extraction,ultrasonic-microwave-assisted extraction and enzyme-ultrasonic synergistic extraction,a reference for the efficient production of fungal melanin is provided. Finally,it summarizes the current situation of the development and application of fungal melanin in agriculture,industry,medicine and other industries at home and abroad in recent years,and discusses the significance and issues of fungal melanin in industrial application. This paper provides reference for promoting the application and development direction of fungal melanin industry in China.

    Sequencing and Analysis of the Whole Genome of Zizhi Cultivar ‘Wuzhi No.2’(Ganoderma sp. strain Zizhi S2)
    CHEN Ti-qiang, XU Xiao-lan, SHI Lin-chun, ZHONG Li-Yi
    2021, 37(11):  42-56.  doi:10.13560/j.cnki.biotech.bull.1985.2021-1158
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    The cultivar ‘Wuzhi No. 2(original name:S2)’ has been applied and extended in south China(Fujian,Guangdong and Guangxi province,etc.),known as Ganoderma sp. strain Zizhi S2 that belongs to Ganoderma sinense complex. Whole genome of the Zizhi S2 was completed after genomic sequencing and assembly using the PacBio SMRT technology and based on the third-generation and second-generation data(3 + 2 strategy),the total length of the sequence was 56.849 Mb,totally 72 scaffolds including nuclear genome and mitochondrial genome. There were 16 681 genes in the nuclear genome,and 13 161 genes were annotated and accounting for 78.89% of the total. Four groups of tandem repeat rRNA clusters,405 non-coding RNAs and 3 305 promoters were predicted and analyzed. The gene sequences of rpb2,beta-tubulin and 18S,28S rRNA(SSU,LSU),laccase isoenzyme genes,squalene synthase and lanosterol synthesis genes,ergo-sterol synthesis and metabolism related genes and their distribution positions were revealed. This finding not only provides reliable information for the molecular identification and strain identification of cultivated varieties(lines)of Zizhi,but also for further mining and utilization of functional genes. Furthermore,this also accumulates scientific data for the subsequent comparative genomic analysis of cultivated Ganoderma spp. complex species in China.

    Characterization of B Mating Loci Identification and Application in Cyclocybe aegerita and C. salicacola
    CHEN Wei-min, CHAI Hong-mei, YANG Wei-xian, MA Yuan-hao, ZHAO Yong-chang
    2021, 37(11):  57-64.  doi:10.13560/j.cnki.biotech.bull.1985.2021-1091
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    The mushroom Cyclocybe aegeritaAgrocybe aegerita)is cultivated widely in China,with rich natural resources and varied genetic background. The confused nomenclature and complex mating behavior hamper the cognition of genetic breeding for C. aegerita. Strain groups of two species,C. aegerita and C. salicacola were employed,and special primer was designed for amplifying to acquire the mating locus fragment of strain group via genome sequencing and sequence analysis for the strain identification and phylogenetic construction. As results,two B mating loci were cloned from two stains of C. aegerita,and a fragment about 8 kb including rcb1,rcb2 and partial non-coding region were conserved. The special primers were designed based the fragments containing variable regions,and then 1-2 types of about 3.2 kb fragments(cbmr)from each tested strain were obtained after the amplification and clone sequencing of 35 strains in the conserved B mating region. The classification of strains based on the cbmr showed high fitness in phylogenetic tree with that of mitochondrial small-subunit (mtSSU),but the former revealed the genetic background of strains more finely. Additionally,the variable regions provided efficient targeting sites for the group and mating type identification. In conclusion,based on the sequence characterization of B mating locus,the corresponding products can be obtained from all tested strains,which can be used as molecular markers for strain and B mating type identification of C. aegerita and C. salicacola.

    Analysis of XBP1 Transcription Factor in Pleurotus ostreatus by RNAi
    QI Yu-hui, HUANG Chen-yang, ZHANG Li-jiao
    2021, 37(11):  65-71.  doi:10.13560/j.cnki.biotech.bull.1985.2021-1068
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    Transcription factor XBP1 is a key regulatory factor for fungi development and other biological processes. In this study,RNA interference method was used to explore its function in the growth and development of Pleurotus ostreatus. The PoXBP1 gene was cloned from the CCMSSC00389(Pleurotus ostreatus). The full-length of PoXBP1 was 1 326 bp and it encoded a protein of 441 amino acids. Bioinformatics analysis showed that XBP1 protein contained HTH APSES domain and had no signal peptide. It was a non transmembrane structural protein.The expression of PoXBP1 gene in different developmental stages of wild type strains decreased in turn in hyphae,primordium,spores,cap and stalk. PoXBP1 interfering strain were screened by Agrobacterium tumefaciens-mediated genetic transformation. Among them,the growth rates of interfering strain RNAiPoXBP1-1 and RNAiPoXBP1-4 were slower than that of wild-type strains,indicating that the expression of PoXBP1 decreased and the growth rate of hyphae and fruiting bodies of P. ostreatus delayed.

    RNA-Seq Analysis of Cordycepin Against Triple-negative Breast Cancer
    HUANG Hai-chen, WU Wen-ya, QI Meng, XUE Fan-zheng, WU Xiao-ping, ZHANG Jun-li, FU Jun-sheng
    2021, 37(11):  72-80.  doi:10.13560/j.cnki.biotech.bull.1985.2021-0444
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    Previous studies have shown that cordycepin,the active ingredient of Cordyceps militaris,can effectively inhibit the growth and metastasis of triple-negative breast cancer xenografts tumor,however its mechanism is not clear yet,thus the purpose of this paper is to predict its mechanism. Taking samples of triple-negative breast cancer xenografts tumor,the molecular mechanism of cordycepin against breast cancer xenografts tumor was analyzed through transcriptome sequencing technology. The results showed that 584 differentially expressed genes were screened using P<0.05,log2|FC|>1 as the standard,including 69 up-regulated genes and 515 down-regulated genes. KEGG analysis demonstrated that cordycepin had molecular regulation on breast cancer xenografts tumors including Hippo signaling pathway,Hedgehog signaling pathway,ECM-receptor interaction,TGF-beta signaling pathway and other cancer-related signaling pathways. GO analysis revealed that these differential genes were enriched in 16 biological processes,such as biological adhesion,growth,metabolic process,and locomotion,etc. It is suggested that cordycepin had significant regulatory effect on the growth and metastasis of breast cancer xenografts tumors. Further protein-protein interaction analysis of these genes in the growth and metastasis process indicated that Hedgehog signaling pathway and Hippo signaling pathway were important potential ones for cordycepin against triple-negative breast cancer. The research results suggest that the Hippo-Yap/TAZ signaling pathway and the Hedgehog-Gli signaling pathway are potential ones,laying the foundation for exploring the molecular mechanism of cordycepin in the treatment of triple-negative breast cancer.

    Structural Characterization,Physicochemical Properties of Melanin from Fruiting Body,Hyphae and Spores of Ganoderma lucidum
    WANG Zhao-yu, CHANG Ming-chang, XU Li-jing, MENG Jun-long, ZUO Ning-ke, PAN Xu
    2021, 37(11):  81-91.  doi:10.13560/j.cnki.biotech.bull.1985.2021-0659
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    In order to explore the difference in structure and physicochemical properties of melanin in fruiting body(GLM),hyphae(GLHM)and spores(GLSM)of G. lucidum,three melanin’s structures were analyzed by elemental analysis,UV-Vis and FT-IR,and the physicochemical properties including solubility,color value and stability,antioxidant activity and inhibitory effect on pancreatic lipase activity in vitro were compared. The results showed that three melanin were eumelanin. Compared with GLM and GLSM,GLHM presented better solubility,color value and stability,as well as stronger antioxidant activity and stronger inhibitory effect on pancreatic lipase activity in vitro. This study will provide a theoretical basis for the bioactivity and practical application of melanin from G. lucidum hyphae.

    Study on Antioxidant and Liver Protection of Polysaccharide from Lyophyllum decastes
    ZHANG Feng-pei, XU Hui, QIU Shao-feng, ZHANG Jun-li, WU Xiao-ping, FU Jun-sheng
    2021, 37(11):  92-100.  doi:10.13560/j.cnki.biotech.bull.1985.2021-0891
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    Lyophyllum decastes is a precious edible and medicinal fungus. The crude polysaccharide of Lyophyllum decastes fruit body has many physiological activities such as anti-tumor and liver protection. The free radical scavenging rate was used to analyze the chemical antioxidant activity of L. decastes polysaccharides,and then H2O2 was used to establish the LO2 liver cell injury model,and to further study the improvement mechanism of L. decastes fruit body polysaccharides on liver cell oxidative stress damage. The results showed that the polysaccharides from L. decastes fruit body had certain scavenging ability to DPPH,ABTS and OH free radicals in terms of anti-oxidation in vitro,and their EC50 values were:0.218,0.027 and 2.744 mg/mL,respectively. In terms of improving liver cell oxidative stress damage,the cell survival rate also increased significantly as the concentration of polysaccharides increased. The cell survival rate reached 94.1% when the concentration of polysaccharides was 5 mmol/mL. In terms of the mechanism of eliminating the body’s peroxidation,the activities of antioxidant enzymes SOD and CAT increased by 2.55 times and 2.17 times in LDFP group,respectively,compared with the model group,and significantly reduced the level of ROS in cells. The polysaccharide from the fruit body of L. decastes has a certain improvement effect on the oxidative damage of liver cells and provides certain research ideas for the preparation of liver-protecting products of L. decastes.

    Evaluation of the Growth and Development Traits for Wild Germplasm of Pleurotus tuoliensis
    YANG Ya-shu, WANG Ying, GAO Wei
    2021, 37(11):  101-108.  doi:10.13560/j.cnki.biotech.bull.1985.2021-1147
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    The phenotypic identification and analysis of growth and development traits for the wild germplasm of Pleurotus tuoliensis were conducted,thereby the diversity and the utilizability of the germplasm from the special P. tuoliensis were explored. A total of 100 wild strains were randomly selected from the collection of China Center for Mushroom Spawn Standards and Control(CCMSSC). The mycelial growth rate on PDA plates and that in substrate tubes of cottonseed husk as culture material,as well as the formation time of primordia were tested and analyzed. According to the results of statistics,the three tested traits were all quantitative traits controlled by multiple loci,and there was no significant correlation among the three tested traits. The broad-sense heritability of the mycelial growth rates was high,indicating that the phenotypic variation of traits was mainly determined by genotypes although influenced by environments. Primordium formation time of strain group from different geographical origin varied significantly,the shortest for the strain from Tuoli,and the longest for the strains from Qinghe,suggesting that it resulted from the different evolution mechanism for different-origin strains. The findings of this study provides scientific basis for exploring useful germplasm in breeding P. tuoliensis and theoretical foundation for converting excellent germplasm into useful parent material.

    Analysis and Evaluation of Nutrient Components in Agaricus bisporus Wild Germplasm Resource
    ZHENG Hui-qing, GUO Zhong-jie, CAI Zhi-xin, LU Yuan-ping, LIAO Jian-hua, CHEN Mei-yuan
    2021, 37(11):  109-118.  doi:10.13560/j.cnki.biotech.bull.1985.2021-1137
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    This work aims to evaluate the nutritional components in wild germplasm resources of Agaricus bisporus,and to screen the germplasm with higher or special nutritional contents,for providing a scientific reference for the breeding of A. bisporus. The contents of protein,amino acid and fatty acid in 93 wild strains of A. bisporus were analyzed and evaluated using 3 main cultivars as controls,and then the germplasm resources with better nutrition were selected based on the nutrient components higher than the average ones. The results showed that the protein content of the wild germplasm of A. bisporus was 29.50-37.60 g/100g,the contents of essential amino acids were 4.51-8.89 g/100g,and the ratios of essential amino acids was 24.69%-40.59%. The linoleic acid content was 4 086.55-14 190.28 mg/kg,and the ratio of unsaturated fatty acids was 77.63%-87.47%. The average variation coefficient of amino acids was 21.05%,and that of linoleic acid was 22.93%. There was abundant variation in the contents of amino acids and fatty acids of 93 wild strains of A. bisporus. Based on the experimental results,14 germplasms with high and balanced nutrient were selected,which may provide parent materials for directive breeding of A. bisporus to improve quality.

    Breeding of Lepista sordida with High-yield Exopolysaccharide by Plasma Mutagenesis
    FAN Min, WANG Li-ning
    2021, 37(11):  119-124.  doi:10.13560/j.cnki.biotech.bull.1985.2021-0278
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    The polysaccharide of Lepista sordida owns huge medicinal value,and breeding L. sordida strain with high-yield polysaccharide could not only enrich the germplasm resources,but also promote the technological innovation and industrial development. To obtain L. sordida strains with high-yield exopolysaccharide,the monokaryon strain LS01_10 derived from protoplast was used as parental strain and plasma mutagenesis was conducted. When the optimal mutagenesis power was 200 W and inducing time was 60 s,5 mutant strains with high-yield exopolysaccharide and stable inheritance were obtained. The exopolysaccharide of these 5 mutant strains was 1.2-2.4 times higher than that of the parental strain. The morphology and color of hyphae of the mutant strains varied at different degree,the biomass was higher than that of the parental strain. The variations in genetic level among mutant and parental strains were confirmed by inter-simple sequence repeat(ISSR)analysis. The mutant strains with high-yield polysaccharide provide important germplasm resource for further resolving the mechanism of high polysaccharide yield.

    Screening of Superior Strains Isolated from Wild Cordyceps militaris in Mountain Tai
    GUO Yu-feng, WANG Qiao, WANG Xiang-feng, ZHOU Ting, YANG Xiao-jun, WANG Qing-ji, WANG Li
    2021, 37(11):  125-133.  doi:10.13560/j.cnki.biotech.bull.1985.2021-1011
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    In order to further dig the resources of Cordyceps militaris in Mountain Tai area and to obtain the superior strains of C. militaris with high yield and high quality,14 wild strains isolated from wild C. militaris in Mountain Tai were used as experimental materials,the mycelial growth rate,colony characteristics,fruiting body morphology and yield,and the main active substances(cordycepin,N6-(2-hydroxyethyl)adenosine,polysaccharide,β-carotenoid,and lutein)were determined,and the characteristics of each strain were evaluated by the normalization method. Finally,2 strains with superior comprehensive characteristics and 1 strain with high cordycepin content were selected. The selected two superior strains had the best comprehensive quality,the cultivation periods of fruit body were both 46.3 d,fruit bodies were thick and long,the biological efficiency was 55.31% and 58.08%,the cordycepin content was 5.43 mg/g and 7.13 mg/g,the adenosine content was 0.38 mg/g and 0.56 mg/g,the polysaccharide content was 90.44 mg/g and 84.68 mg/g,respectively. The high cordycepin content strain had lower yield,but the cordycepin content was up to 15.14 mg/g and adenosine content was also high(0.66 mg/g).

    Formula Optimization of the Novel Particle Pre-culture Spawn of Agaricus bisporus
    ZENG Zhi-heng, ZENG Hui, CAI Zhi-xin, GUO Zhong-jie, LU Yuan-ping, CHEN Mei-yuan, LIAO Jian-hua, DAI Jian-qing
    2021, 37(11):  134-141.  doi:10.13560/j.cnki.biotech.bull.1985.2021-1113
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    In order to develop a novel particle pre-culture spawn of Agaricus bisporus with high mycelia content,strong mycelia vitality,more germination points and loose uniformity,single factor and orthogonal tests were adapted and the relative amount of mycelium was used as an index to investigate the effects of C/N,initial pH,water content and the added amount of perlite on the novel particle pre-culture spawn of A. bisporus,and then the formula was optimized. Then we investigated the effect of propagation of the novel particle pre-culture spawn of A. bisporus by the comparison of multiple indexes while using the grain pre-culture spawn as control. The results showed that the lower the C/N content and the less perlite of A. bisporus granule matrix formula were added,the higher the relative mycelia quantity was detected. The optimal formula of the novel particle pre-culture spawn was A1B1C3D3,constituted by rapeseed meal 78 g,wheat bran 10 g,secondary compost 20 g,diatomite 20 g,perlite 5 g,and light calcium carbonate 15 g. The initial pH was 7.6,and water content was 54%. The particle number of the novel particle pre-culture spawn was 280-300 particles/g,which was more than that of millet pre-culture spawn 180-200 particles/g and significantly more than that of wheat pre-culture spawn 16-18 particles/g. The relative mycelia of the novel particle pre-culture spawn was 326.5 mg/g. It was 1.29 times of 252.9 mg/g of millet pre-culture spawn and 2.35 times of 139.2 mg/g of wheat pre-culture spawn,respectively. When the inoculation amount was 0.2%,the average bag-filled time of the novel particle pre-culture spawn was 15.8 d,which was shorter than 18.4 d of millet pre-culture spawn and 19.6 d of wheat pre-culture spawn. It indicates that the novel particle pre-culture spawn had advantages over grain pre-culture for propagating spawn of A. bisporus.

    Immobilization of Laccase from Trametes orientalis and Its Application for Decolorization of Multifarious Dyes
    WANG Hao, TANG Lu-xin, MA Hong-fei, QIAN Kun, SI Jing, CUI Bao-kai
    2021, 37(11):  142-157.  doi:10.13560/j.cnki.biotech.bull.1985.2021-1173
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    Laccase as a natural green catalyst has high catalytic efficiency,broad substrate specificity,fewer requirements for cofactors and specific environmental conditions,nontoxicity,etc.,and thus plays a powerful role in a vast of industrial areas:biopulping and papermaking,biosynthesis,enhancement of fiber properties,food processing,biosensor manufacturing,and bioconversion and refinement of agricultural and forestry wastes,especially biodegradation and bioremediation of environmental contaminants. However,the use of free laccase for practical applications is still limited due to its low stability and high production costs. Immobilization can overcome some of the aforementioned limitations by improving the thermostability of the enzyme and its resistance to extreme conditions and chemical agents. Additionally,the immobilized laccase may be easily separated from its reaction products,allowing the enzymes to be employed in continuous bioreactor operations. In this study,a laccase Tolacc-T secreted by a white rot fungal strain Trametes orientalis with high laccase-producing capacity screened previously,was purified and immobilized onto chitosan carrier with crosslinker glutaraldehyde,named Tolacc-T@Chit@GA. The optimal conditions for acquiring Tolacc-T@Chit@GA were 0.7%(V/V)glutaraldehyde concentration,4 h crosslinking time,6.0 mL enzyme amount,and 6 h immobilized time. The pH adaptability,resistance to thermal denaturation,and storage stability of Tolacc-T@Chit@GA were apparently enhanced compared with Tolacc-T. The operational stability and durability during multiple reuses also demonstrated superiority;the relative activity of Tolacc-T@Chit@GA still remained over 80% after 7 cycles of continuous use. Additionally,Tolacc-T@Chit@GA was capable of decolorizing multifarious dyes,in particularly metal-complex dye naphthol green B,whose partially metabolic by-products were identified as 1-naphthylamine,2-naphthol,1-amino-2-naphthol,1-nitroso-2-naphthol,and 1-nitroso-2-naphthol-6-sulfonate through GC-MS detection. These findings suggest that the immobilized laccase Tolacc-T@Chit@GA from T. orientalis presents better stability and reusability and therefore could be used in many applications.

    Screening of High-efficiency Cellulose-degrading Microorganism from Spent Lentinula edodes Substrate and Optimization of Its Enzyme Production
    TAO Zhi-dong, HE Yan-hui, DENG Zi-he, SUN Lin-lin, WU Zhan-sheng
    2021, 37(11):  158-165.  doi:10.13560/j.cnki.biotech.bull.1985.2021-1120
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    Utilizing spent Lentinula edodes substrate to develop organic fertilizer is major trend of converting waste bacterial residue into resources. In order to compost the spent L. edodes substrate,a high efficient cellulose-degrading strain DGW1 was isolated from the spent L. edodes substrate,the conditions of cellulase production were optimized,and the degradation capacity of the spent L. edodes substrate was evaluated,which lays a foundation for the subsequent composting fermentation of spent L. edodes substrate to produce bio-organic fertilizer. The strains were preliminarily screened by CMC-Na culturing method and Congo red dyeing and re-screened in combination with filter paper disintegration test and cellulase activity test. The strain was identified by morphological observation and 18S rDNA molecular biology,and the conditions of producing cellulose-degrading enzyme by the strain DGW1 were optimized. The results showed that the highly cellulolytic strain DGW1 was identified as Trichoderma reesei. The filter paper strips were degraded to paste in the 7 d. The optimal conditions of the strain DGW1 were temperature 30℃,time 4 d,the filter paper activity(FPase)was 112.71 U/g,and the high enzyme activity at pH 4-7 was not lower than 96 U/g. The degradation rate of the strain DGW1 on spent L. edodes substrate was 31.14%(14 d). Therefore,the strain DGW1 can effectively degrade spent L. edodes substrate,and its cellulase activity was high,which has great application potential for composting of spent L. edodes substrate and preparation of bio-organic fertilizer.

    Impacts of Morel Cultivation on the Microbial Community and Physiochemical Characteristics in a Substratum of Desert Sand
    TAN Hao, LIU Tian-hai, YAN Shi-jie, YU Yang, JIANG Lin, PENG Wei-hong
    2021, 37(11):  166-177.  doi:10.13560/j.cnki.biotech.bull.1985.2021-1110
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    In order to utilize desert sand replacing soil as a substrate for morel cultivation,this study is aimed to dissect the impacts of morel cultivation on the microbial community and physiochemical characteristics of the desert sand substrate. Metabarcoding was adopted to track the composition and diversity of bacterial and fungal communities in the desert sand with or without morel cultivation. Physiochemical characteristics such as total organic carbon,humic substances,and nitrogen content were measured. The harvested morel yield was(1 210±259)g/m2 fresh weight,indicating that cultivating morel in desert sand is feasible. The microbial diversity in the desert sand substratum decreased temporarily during the cultivation of the morel,and increased again after the morels were harvested. The fungal communities were dominated by Ascomycota. As the morel proliferated in the desert sand,a large number of hyphae that formed a network entangling and fixing desert-sand particles were observed by scanning electron microscopy. The bacterial communities were dominated by Proteobacteria,Actinobacteria,and Bacteroides. The relative abundance of Pseudomonas increased significantly during the growth period of morel mycelium. Cyanobacteria expanded significantly after the harvest,accompanied by a significant increase in the contents of total nitrogen and ammonium nitrogen,that surpassed the initial levels before morel sowing. Morel cultivation increased the organic matter content in the desert sand substrate by 7 times. The contents of humic acid,fulvic acid,and humin in the substrate increased significantly after morel fruiting and harvest. The results demonstrate the application potential of cultivating morel in desert sand to harvest high-value agricultural products while improving the physiochemical properties of the desert sand.

    Study on the Rheological Properties of the Mixtures with Tremella fuciformis Gum
    CHEN Jian-qiu, HUANG Sheng, ZHAO Wei-chao, ZHAN Guan-ping, SUN Shu-jing, CHEN Li-ding
    2021, 37(11):  178-189.  doi:10.13560/j.cnki.biotech.bull.1985.2021-0634
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    Tremella fuciformis gum(TFG),used as new food additives,is prepared by a simple leaching process with T. fuciformis polysaccharides as its main component. The two kinds of new complex gum solutions of xanthan gum-T. fuciformis gum(XG-TFG)and guar gum-T. fuciformis gum(GG-TFG)were prepared with different ratios. The apparent viscosities and rheological properties of the complex gum solutions and two single colloids(XG and GG)were analyzed under different physiochemical conditions. And the sensory evaluations of yogurt samples were also compared with addition of different proportion of the complex gums. The results showed that the apparent viscosities of all the colloids increased non-linearly with the increase of colloidal concentration. The apparent viscosity of the complex gums were affected less than that of the single gum by the ion types and ionic concentration. Furthermore,the apparent viscosities of the complex gums were steady in the weak acid and weak base,but decreased with the increasing heating time at a lower temperature. The decrease of the apparent viscosity caused by adding sugar(low concentration)or μLtrasonic treatment was eliminated by adding TFG. The apparent viscosities of all colloids were stable with freeze-thaw treatments. The results of rheological test confirmed that the solutions of the complex gums were pseudoplastic fluids with excellent in-shear stuctural recovery. The complex gum with the ratio 1:1 of GG to TFG was the best formula of flavor to yogurt,indicating that the texture and flavor of yogurt was improved by adding complex gum in the proper ratio. The above results will provide the theoretical basis and the applications the complex gums prepared from TFG and other colloids.

    Screening and Identification of IQM4-Interacting Proteins in Arabidopsis thaliana
    YANG Hua-jie, ZHOU Yu-ping, FAN Tian, LV Tian-xiao, XIE Chu-ping, TIAN Chang-en
    2021, 37(11):  190-196.  doi:10.13560/j.cnki.biotech.bull.1985.2021-0235
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    The IQM4 protein in Arabidopsis thaliana encoded by AT2G26190 is a Ca2+-independent calmodulin-binding protein with an IQ motif. Screening and identifying the IQM4-interacting protein would lay a foundation for further understanding the signal pathways involved by IQM4. Yeast two-hybrid experiment was used to screen A. thaliana seedling cDNA library,one-to-one yeast two-hybrid system and bimolecular fluorescence complementary experiment were adapted to validate the interactions among proteins. The results showed that the 15 candidates of IQM4-interacting proteins were obtained,and the interaction of IQM4 with CAT2 or FBA1 was confirmed,indicating that IQM4 interacted with CAT2 or FBA1 in plant cells.

    Analysis of the MATE Family in the Seeds of Prunus sibirica and Cloning and Expression of Its Important Member MATE40
    LIU Xiao-han, LIN Zi-xin, XIU Yu, DANG Yuan, LIN Shan-zhi
    2021, 37(11):  197-211.  doi:10.13560/j.cnki.biotech.bull.1985.2021-0590
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    The development and utilization of Prurus sibirica seeds oil and related products are greatly limited by amygdalin in the seeds of P. sibirica. Multidrug and toxic compound extrusion(MATE)proteins play an important role in the transport of amygdalin. Bioinformatics methods were used to predict and analyze the PsMATE family genes in P. sibirica seed. Meanwhile,qRT-PCR was used to analyze their expression patterns in different developmental stages of P. sibirica seeds. qRT-PCR was applied to analyze the tissue specific expression of PsMATE40,and the GFP fusion protein expression method was employed to analyze their subcellular localization. As results,17 members of PsMATE gene family from the seeds of P. sibirica were obtained through functional annotation and bioinformatics analyses based on the previous transcriptomics data of P. sibirica seeds in our lab,they might be divided into three subfamilies(subfamily 1/2/4). The secondary structure of the encoded proteins mainly contained α-helix and multiple phosphorylation sites. Except for PsMATE23,PsMATE33,PsMATE35A and PsMATE35B,the other 13 proteins were all alkaline. Fifteen PsMATE proteins were highly hydrophobic transmembrane transporters and located in plasma membrane. qRT-PCR analysis showed that all members of the PsMATE family were expressed in the developing seeds of P. sibirica,but the expressions varied significantly. The expression of PsMATE40 gene expressed the highest among PsMATE family genes. Further analysis using phylogenetic trees revealed that PsMATE40 was clustered with MATE protein that was identified as amygdalin transporter. Therefore,it is suggested that PsMATE40 gene plays an important role in amygdalin transport in the seeds of P. sibirica. The PsMATE40 gene was successfully cloned. The qRT-PCR analysis showed that PsMATE40 presented the highest transcription level in the seeds of P. sibirica,whereas the lowest in the roots,emphasizing that PsMATE40 was specifically responded to different tissues of P. sibirica. The plant expression vector pBI121-GFP-PsMATE40 was constructed and transiently transformed into leaves of Nicotiana benthamiana,and the result by fluorescence microscopy indicated that the PsMATE40 transport protein was localized in the plasma membrane. In conclusion,these results lay the important foundation for understanding the transmembrane transport mechanism of amygdalin in the seeds of P. sibirica and molecular orientation cultivation of oil plants with low amygdalin content.

    TkDREB2 Clone from Taraxacum kok-saghyz and Drought Tolerance Analysis of Transgenic Nicotiana tabacum
    ZHANG Yun-chuan, LIN Yi-xuan, CAO Xin-wen, WANG Hai-nan, YAN Jie
    2021, 37(11):  212-224.  doi:10.13560/j.cnki.biotech.bull.1985.2021-0108
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    In order to explore the important role of jasmonic acid on the drought resistance of plants,the differential expression profile of the transcriptome of Taraxacum kok-saghyz externally treated with methyl jasmonate(MeJA)was conducted,and an AP2/EREBP subfamily gene DREB,whose expression was significantly up-regulated by jasmonic acid,was screened and cloned,named as TkDREB2. It was subjected to bioinformatics analysis and transformed to tobacco. For further identifying the drought resistance function of TkDREB2 transgenic tobacco plants during the development period,the transgenic tobacco was subjected to natural drought treatment and related physiological indicators were measured. The results showed that the expression levels of genes related to jasmonic acid synthesis and transcription factors AP2/EREBP,MYB,MYC,NAC and WRKY changed significantly in the transcriptome analysis of methyl jasmonate treatment. The full-length CDS sequence of the cloned TkDREB2 gene was 1 002 bp,encoding 333 amino acids,and belonged to the DREB type transcription factor of the AP2/EREBP subfamily. The phylogenetic tree analysis showed that this protein had the closest homology to the DREB protein of alfalfa. After 15 d of natural drought treatment for genetically modified tobacco,it was found that wild-type leaves began to wilt;continuing treatment to 22 d,wild-type leaves severely wilted and the leaves of genetically modified tobacco only slightly wilted. The physiological indicators of the wild-type and the genetically modified tobacco after normal growth and drought treatment were determined. Under normal growth conditions,the superoxide dismutase(SOD),peroxidase(POD)and catalase(CAT)activities of the genetically modified tobacco were approximately twice that of wild-type. After drought treatment,the activities of CAT,SOD and POD in the genetically modified tobacco were about 2 times,2 times and 1.5 times that of wild-type,respectively,and the content and relative conductivity of malondialdehyde were only about 1/2 of that of wild type. The above results indicate that TkDREB2 can actively respond to the induced expression of jasmonic acid. Overexpression of the TkDREB2 gene can significantly improve the drought resistance of tobacco. It is speculated that DREB2 transcription factor may play an important role in regulating the drought resistance of Taraxacum kok-saghyz by jasmonic acid signal transduction.

    Isolation and Antibacterial Activity of Actinomycetes from the Nodules and Rhizosphere Soil of Hippophae rhamnoides in Tibet
    LUO Ya-jun, SUN Hong-min, HE Ning, YUAN Li-jie, XIE Yun-ying
    2021, 37(11):  225-236.  doi:10.13560/j.cnki.biotech.bull.1985.2021-0288
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    In order to provide new microbial resources for the development of natural product drugs,the diversity and antibacterial activity of actinomycetes from the root nodules and rhizosphere soil samples of Hippophae rhamnoides in Nyingchi and Shannan of Tibet were explored. Dilution coating method was empployed to isolate the cultivable actinomycetes from 10 samples. After the 16S rRNA sequence alignment of the strains,the neighbor-joining method(N-J)was used to construct a phylogenetic tree to analyze the species diversity of actinomycetes. The microplate method was adapted to conduct fermentation and antibacterial activity evaluation of representative strains;and ultra-performance liquid chromatography-mass spectrometry(UPLC-MS)was to investigate the metabolites of active strains. A total of 112 strains of actinomycetes belonged to 23 genera,12 families and 7 orders were isolated from 10 samples,in which Streptomyces was the dominant genus. The results of antibacterial activity showed that 17 strains of estimated actinomycetes presented antibacterial activity against at least one of the tested bacteria,and the positive inhibition rate was 36.9%. Sixteen actinomycetes showed strong inhibitory activity against common clinical methicillin-resistant Staphylococcus aureus(MRSA),13 of which had higher inhibitory rate than the positive control drug vancomycin. In addition,7 of evaluated actinomycetes demonstrated inhibitory activity against carbapenem-resistant Acinetobacter baumannii(CRAB),from which Streptomyces sp. XZ19-363 had the strongest antibacterial activity against CRAB,with an inhibition rate of 91.3%. UPLC-MS analysis revealed that the strains with broad-spectrum antibacterial activities produced relatively abundant secondary metabolites in different media. The resources of cultivable actinomycetes from H. rhamnoides nodules and rhizosphere soils in Nyingchi and Shannan regions of Tibet both are rich and diverse,and possess promising antibacterial activities with rich metabolites.

    Effects on Pathogen Inactivation at the Thermophilic Stage of Aerobic Composting and Its Impact Factors
    YANG Tian-jie, ZHANG Ling-xin, GU Shao-hua, PAN Zi-hao, JIANG Gao-fei, WANG Shi-mei, WEI Zhong, XU Yang-chun, SHEN Qi-rong
    2021, 37(11):  237-247.  doi:10.13560/j.cnki.biotech.bull.1985.2021-0048
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    There are large numbers of human and animal-plant pathogens at high risk of disease in the agricultural organic waste such as livestock manure and plant straws. Effects of pathogen inactivation during the thermophilic stage of aerobic composting and key factors affecting the survival of pathogens need to be investigated. Firstly,the pathogen survivals in 25 kinds of commercial organic fertilizers on the market were detected. Secondly,pathogen inactivation during the thermophilic stage of aerobic composting were investigated. Effects of temperature,pH and ammonium content on the survival of two model pathogens(Escherichia coli and Ralstonia solanacearum)were explored. Three of the 25 commercial organic fertilizers contained living potential pathogens,indicating that the organic fertilizers on commercial market still had potential environmental threats. The inactivation testing of pathogens during the thermophilic stage of aerobic composting showed that only pathogen DNA at very low abundance was detected in the composting heaps. The results in the laboratory showed that the survival of two model pathogens decreased with the increase of temperature,and the inactivation time became less. The pH presented different effects on the two pathogens. The higher the ammonium content was,the stronger the inhibitory effect on the growth of the two pathogens was. Thermophilic stage is important to pathogen inactivation during aerobic composting. Thermophilic stage during composting may effectively reduce most pathogens in the raw materials of composting such as livestock and poultry manure,which meet the requirements of relevant industry standards. Temperature,pH and ammonium content are important factors affecting pathogen survival in the composting heaps.

    Acquisition and Expression Analysis of the Transcription Factor Whirly1 from Haematococcus pluvialis
    LIU Wen-fu, HUANG Dan-qiong, HU Qun-ju, WANG Chao-gang
    2021, 37(11):  248-256.  doi:10.13560/j.cnki.biotech.bull.1985.2020-1348
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    Whirly transcription factors are found in plants ubiquitously,and play a role in plant growth and stress resistance. Uncovering the functions of Whirly transcription factors would help us understand the response mechanism to stress in Haematococcus pluvialis. Hence,a Whirly transcription factor named HpWhirly1 was isolated and cloned based on the transcriptome data of H. pluvialis 192.80 and its structure and expression were analyzed. The cDNA sequence of this transcription factor consisted of 924 bp and genome sequence was 2 556 bp with 5 exons and 4 introns. Results showed that HpWhirly1 was predicted to contain 244 amino acids and had the conserved domain of Whirly transcription factor. Further analysis showed that the expression of HpWhirly1 was up-regulated during the early stage of sodium acetate and salicylic acid stresses,while it was down-regulated under strong light sodium acetate combined stress and nitrogen deficiency stress. The above results indicated that HpWhirly1 might play a role in H. pluvialis when facing stresses and could respond to them. The results of this study are conducive to further studying the functions of Whirly transcription factors and its effects on the stress response of H. pluvialis.

    Cloning,Expression and Characterization of a Novel Acyltransferase GPAT
    LIU Shan, YE Wei, ZHU Mu-zi, LI Sai-ni, DENG Zhang-shuang, ZHANG Wei-min
    2021, 37(11):  257-266.  doi:10.13560/j.cnki.biotech.bull.1985.2020-1508
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    Lithocarpins,a new polyketide skeleton compound isolated from marine fungus Phomopsis littocarpus,has the potential to be developed as lead compound of novel antitumor drugs. Based on genome sequencing and bioinformatics analysis,the biosynthetic gene cluster of lithocarpins was predicted. The unknown functional gene g7779 was amplified and successfully expressed in Escherichia coli. The recombinant protein was purified by Ni-NTA affinity chromatography. The function of the purified protein was analyzed by mass spectrometry,bioinformatics analysis combined with enzyme activity detection. The results showed that g7779 encoded a novel bi-functional enzyme(glutamic-pyruvic transaminase-acyltransferase,GPAT)with strong acyltransferase activity and certain glutamic pyruvic transaminase activity,its purity was 98.6%. Structural analysis showed that the protein was composed of 326 amino acids with a molecular weight of 36 kD. The secondary structure of GPAT consisted of 55.52% α-helix,29.45% random coil,9.82% extend strand and 5.21% β-turn. The activity of acyltransferase demonstrated that the optimal reaction temperature of GPAT for acetyl CoA was 35℃,and the highest enzyme activity was at pH 7.0. GPAT showed good thermal stability at 40℃,and the residual enzyme activity was > 80% after 2 h treatment at this temperature;but the thermal stability was poor at 50℃,and the residual enzyme activity was < 10% after 30 min. The values of Km and Vmax of GPAT towards acetyl CoA were 761.57 μmol/L and 29 370 μmol/(mg·min),respectively. The results may provide molecular biological basis for the elucidation of lithocarpins biosynthesis pathway.

    Identification and Function Study of a New Type of sRNA N155 from Aeromonas veronii
    HE Jin-hua, MA Xiang, TANG Yan-qiong, WANG Dan, LI Hong, LIU Zhu
    2021, 37(11):  267-275.  doi:10.13560/j.cnki.biotech.bull.1985.2020-1506
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    Aeromonas veronii is a new type of pathogen that can infect both fish and mammals including humans. and its pathogenic mechanism is not fully understood. A new sRNA N155 in wild type A. veronii C4 was identified based on the transcriptome data,and molecular biological methods such as homologous recombination were used to construct the sRNA N155 deletion strain. The results of transcriptome data and RT-qPCR analysis showed that sRNA N155 was independently transcribed. Sequence alignment analysis indicated that sRNA N155 was species-specific and only existed in Aeromonas. The results of growth curve determination and swimming motility experiments revealed that the knockout of sRNA N155 didn’t affect the growth of A.veronii,but caused the swimming motility of A. veronii reduced. The ΔsRNA N155 strain successfully constructed in this study provides a reliable material for further research on the function of sRNA N155 in A. veronii.

    Community Characteristics of Methanogens in Alpine Wetland Driven by Precipitation Changes
    ZHANG Ni, BAO Han, ZUO Di-zhao, CHEN Ke-long
    2021, 37(11):  276-284.  doi:10.13560/j.cnki.biotech.bull.1985.2020-1580
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    Soil microorganism in alpine wetland is very sensitive to climate change. In order to study the response of soil methanogens community to precipitation changes in alpine wetlands on the Qinghai-Tibet Plateau,5 precipitation gradients were set up,including natural rainfall,25% and 50% decrease of natural rainfall,and 25% and 50% increase of natural rainfall. McrA gene with high-throughput sequencing was used to analyze the community structure and diversity of soil methanogens. The dominant methanogens in alpine wetlands were Methanomicrobiales,Methanosarcinales and Methanobacteriales. The relative abundance and diversity index of methanogens significantly decreased under rainfall increasing treatment,and the relative abundance and diversity index of methanogens significantly increased under rainfall decreasing treatment. The response of methanogen community composition to 50% increase or decrease of rainfall was more significant,only Methanothrix was more sensitive to 25% rainfall increase and Methanobacterium was more sensitive to 25% rainfall reduction treatment. The richness index of methanogen community was more sensitive to the 50% increase and 25% decrease of rainfall,Shannon and Simpson diversity indices showed the opposite. Lefse analysis showed that 16 different microbial communities were generated after treatment with different precipitation gradients,with the most different microbial communities under treatment with 50% decrease of rainfall,in a total of 9 different microbial communities from the class level to the genus level. In conclusion,precipitation change significantly affects the community structure and diversity of methanogens in alpine wetland.

    Development of a Innovative Fluorescent Quantitative PCR Method for Salmonella Based on Fluorescent Self-quenching Primers
    FENG Min, LI Shu-ting, ZHANG Yang-zi, SU Yuan, ZHU Long-jiao, CAO Ji-juan, LIU Hai-yan, XU Wen-tao
    2021, 37(11):  285-292.  doi:10.13560/j.cnki.biotech.bull.1985.2021-0101
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    Salmonella is a common food-borne pathogen,and food-borne disease caused by Salmonella is in the top of a list. Fluorescence quantitative polymerase chain reaction(FQ-PCR)is an accurate and reliable amplification technique for nucleic acid quantification. The commonly used fluorescent-labeled probe methods make the amplification systems complicated and the cost of primer synthesis high. In order to simplify the FQ-PCR amplification system and reduce the modification of the labeling group,it is planned to conduct an innovative FQ-PCR(IFQ-PCR)for the quantitative detection of template DNA through single-labeled fluorescent self-quenching primers. The single-labeled hairpin type fluorescent self-quenching primer was designed according to Salmonella-specific genes,and applied to FQ-PCR to conduct the detection of Salmonella. The designed self-quenching primer was integrated with probe,only a single label was required,and the amplification system did not require the additional probes or dyes,thus the amplification system was simplified and detection cost was reduced. Meanwhile,the hairpin structure of the primers improved the specificity of the system. At the optimal primer concentration(0.4μmol/L),the logarithm of the Salmonella concentration showed a good linear relationship with cycle threshold value in the concentration range of 101-105 CFU/mL,with R2 as high as 0.99 and detection limit as low as 2 CFU/ mL,the amplification detection was completed within 1.5 h,and the stability of the method met the requirements. Therefore,an IFQ-PCR based on fluorescent self-quenching primers was developed to have the simple,rapid,sensitive,specific and low-cost detection of Salmonella.

    Establishment of a Method Identifying the Varieties of Hulless Barley Based on Fluorescence Detection Technology
    GUAN Jun-jiao, YANG Xiao-hong, ZHANG Peng, HUANG Qing-mei, ZHANG Jian-hua
    2021, 37(11):  293-302.  doi:10.13560/j.cnki.biotech.bull.1985.2020-1494
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    A series of SSR core primers were screened to provide a DNA fingerprinting of hulless barley varieties,which may provide high-throughput detection method for the breeding and variety identification of hulless barley. First of all,24 hulless barley germplasms with large morphological differences were used,42 primers were screened from the original 198 SSR primers,which had clear amplification bands,rich polymorphism and stable amplification. These screened primers were labeled with fluorescent,and used for the PCR amplification of the total 226 cultivars. The amplified products were detected by capillary electrophoresis. Finally,28 pairs of SSR fluorescent primers were screened to establish an identification system for hulless barley variety based on the high-throughput fluorescent SSR marker. And the selected 28 primers were used to construct DNA fingerprinting for identifying the 226 cultivars of hulless barley. A total of 252 alleles were detected by 28 pairs of SSR primers,the effective number of alleles ranged from 5 to 16,and the average number of alleles was 9. The genetic diversity ranged from 0.48 to 0.86 and the average value was 0.68. The polymorphism information content(PIC)changed from 0.44 to 0.84 and the average value of PIC was 0.65. The genetic distance of 226 materials was 0-0.99. This set of primers distinguished the most of the test materials. Seven SSR primers(Bmag0211,Scssr07759,HVM62,EBmac0679,Scssr03907,Bmag0870,and EBmac0827)with good amplification and detection effect as well as distributed in different chromosomes were chosen from the 28 SSR primers,and they were used for constructing DNA fingerprinting spectrum. The corresponding reference cultivars to major allelic variations of 7 pairs of primers were selected to eliminate the errors caused by different platforms and experimental batches. These reference cultivars can be used as the basis for reading bands of ordinary polyacrylamide gel electrophoresis. In this study,a SSR high-throughput identification system was constructed in two detection platforms(fluorescent capillary electrophoresis platform and polyacrylamide gel electrophoresis platform)based on 28 pairs of primers.