Loading...

Table of Content

    26 September 2026, Volume 42 Issue 9
    Regulatory Mechanism of Plant Floral Meristem Activity
    WANG Xin, CHEN Wei, SUN Bo
    2026, 42(9):  1-13.  doi:10.13560/j.cnki.biotech.bull.1985.2025-0924
    Asbtract ( 2403 )   HTML ( 23)   PDF (5230KB) ( 402 )  
    Figures and Tables | References | Related Articles | Metrics

    Flowers, the reproductive organs of angiosperms, have evolved highly diverse forms. The floral meristem (FM) provides the cellular basis for the development of floral organs, and its activity determines the FM size and floral organ numbers. The precise regulatory network including environmental signals, phytohormones, and endogenous regulatory factors determines the initiation of floral primordia, the establishment and timed termination of FM, and floral organ identity specification. Since the regulation of floral development and FM activity directly affects the yield of crops, it has been a hotspot for crop breeding. With the model plant Arabidopsis thaliana, this review systematically summarizes the molecular mechanisms governing floral primordium initiation and FM establishment mediated by auxin signaling and downstream transcription factors. Besides, this review also details the determining role of “ABCDE” model for floral organ identity, the CLAVATA-WUSCHEL negative feedback loop centered FM activity maintenance and suppression, and the timed FM termination pathway orchestrated by multiple transcription factors. This review also summarizes the latest progress in floral development and FM activity regulation in monocotyledonous crops (including rice (Oryza sativa) and maize (Zea mays)).By comparing mechanisms of flower development and FM regulation in monocot crops (e.g., rice, maize) with those in dicots (e.g., Arabidopsis, tomato), this review reveals the determining roles of the “ABCDE” model in floral organ identity, and the conservation of CLE (CLV3/ ENDOSPERM SURROUNDING REGION) peptide pathways in FM suppression across angiosperms. On this basis, we speculate that the C-class homeotic gene-C2H2/YABBY transcription factor module is a key regulator of timed FM termination in angiosperms. The review also covers emerging technologies in FM research, particularly highlighting the application potential of rapidly advancing single-cell (nucleus) transcriptomics, spatial transcriptomics, and single-cell multi-omics sequencing. These technologies overcome the challenges of FM heterogeneity and cellular diversity, enabling efficient and in-depth dissection of FM regulatory networks in the multi-omics era. Finally, we outline future research directions and potential challenges in FM development, aiming to provide a theoretical basis for elucidating FM regulatory mechanisms and designing molecular breeding strategies based on FM activity.

    Advances in Regulation of Anther Tapetum Development under Temperature Stress
    NIE Jia, LIN Hui-zi, TANG Zhe-yuan, CHEN Li-yu
    2026, 42(9):  14-28.  doi:10.13560/j.cnki.biotech.bull.1985.2026-0046
    Asbtract ( 1499 )   HTML ( 23)   PDF (3046KB) ( 119 )  
    Figures and Tables | References | Related Articles | Metrics

    With the escalation of global warming, extreme weather events have become more frequent, leading to temperature stress that severely compromises pollen fertility and results in significant agricultural losses. The tapetum, consisting of secretory cells located in the inner wall of the anther, provides vital nutrients for microspore development and materials essential for pollen exine formation. During anther development, tapetum cells undergo programmed cell death (PCD); deviations in the timing of this process, whether premature or delayed, can lead to pollen sterility. Recent studies indicate that high temperatures primarily trigger early PCD in tapetum cells, whereas low temperatures tend to inhibit or delay it. This process is often accompanied by excessive accumulation of reactive oxygen species (ROS) and hormone signaling disruption. Additionally, temperature stress induces structural and functional abnormalities in the endoplasmic reticulum (ER), resulting in massive accumulation of misfolded and unfolded proteins. Temperature stress can also directly disrupt protein homeostasis by interfering with protein degradation. Furthermore, the genetic module DYT1-TDF1-AMS-MYB80-MS1, which regulates the development and degradation of the anther tapetum, also plays an important role in responding to temperature stress. In this review, we examine the phenotypic characteristics of tapetal cells under high and low temperature stress, and summarize how these stresses regulate the expression of the tapetal DYT1-TDF1-AMS-MYB80-MS1 transcriptional activation cascade. This regulation disrupts the homeostasis of ROS, ER and proteins, and triggers phytohormone signaling disruption, interfering with tapetal development and the timing of PCD, ultimately affecting pollen fertility. In addition, we discuss the challenges of studying the effects of temperature stress on pollen fertility during the sexual reproductive phase of plants, and explore the potential applications of these studies in crop breeding and agricultural production. These applications include breeding temperature-tolerant cultivars, enriching crop stress resistance gene pools, optimizing cultivation management strategies, and developing novel chemical regulators.

    Research Progress on Cytoplasmic Male Sterility and Fertility Restoration in Rice
    LIU Yang, Xu Zuo-peng, ZHANG Hong-gen, Liu Qiao-quan, Tang Shu-zhu
    2026, 42(9):  29-41.  doi:10.13560/j.cnki.biotech.bull.1985.2026-0390
    Asbtract ( 847 )   HTML ( 36)   PDF (1732KB) ( 112 )  
    Figures and Tables | References | Related Articles | Metrics

    Cytoplasmic male sterility (CMS) is a type of male sterility governed by the interaction between cytoplasmic and nuclear genes. Male sterile rice plants possess normal female organs and can set seeds by accepting foreign pollens, a trait that eliminates the need for artificial emasculation and thus enables efficient and convenient hybrid seed production. To date, several CMS types have been utilized in rice production. With advances in genomics and gene editing technologies, multiple CMS-associated genes and fertility restorer genes have been identified or cloned. This review mainly summarizes research progress in the following areas: types and utilization status of male sterile cytoplasms in rice, strategies for identification and validation of male sterility genes, the mechanisms underlying male sterility, as well as mapping and restoration mechanisms of fertility restorer genes for different sterile cytoplasms. Perspectives are also proposed on standardizing the nomenclature, deepening the application of mitochondrial editing technologies, elucidating the molecular mechanisms of cytoplasmic male sterility and fertility restoration, and paying attention to minor-effect restorer genes. This review aims to serve as a reference for basic research and breeding applications of cytoplasmic male sterility and fertility restoration in rice.

    Functions and Applications of Trichomes in Ornamental Plants
    HUANG Run-huan, CHEN Yun-yi, CHEN Hui-fang, YIN Li-li, YU Chao
    2026, 42(9):  42-56.  doi:10.13560/j.cnki.biotech.bull.1985.2026-0049
    Asbtract ( 989 )   HTML ( 14)   PDF (11235KB) ( 100 )  
    Figures and Tables | References | Related Articles | Metrics

    Trichomes are epidermal appendages derived from aboveground plant organs, exhibiting diverse morphologies and extensive functions. They play a central role in plant adaptation to the environment and in the synthesis of secondary metabolites. In recent years, trichomes have emerged as one of the hotspots in plant research, serving as an ideal model for studying cell differentiation and development, as well as natural “metabolic factories”. In ornamental plants, trichomes not only directly influence key ornamental traits such as the texture of flower color and floral scent components, but are also closely associated with environmental adaptability. This makes them highly valuable for breeding new germplasm that combines aesthetic qualities with stress resistance. Currently, systematic research on trichomes in ornamental plants remains limited, with most studies still at the stage of basic morphological observation and description. The molecular regulatory mechanisms underlying trichome development, metabolic synthesis pathways, and their deeper connections with the formation of ornamental traits require urgent further investigation. Starting from morphology, this paper systematically elaborates on the traditional classification system based on function and structure. At the level of evolutionary development, it focuses on the complex evolutionary processes involving the multiple origins and convergent evolution of trichomes. Meanwhile, with the MYB-bHLH-WD40 (MBW) complex as the core, it explains the fundamental regulatory network of trichome development, as well as the influences of hormone signals and environmental stress, exploring the diversity and specificity of trichome regulatory mechanisms in ornamental plants. The paper summarizes the core biological roles and integrated application value of trichomes in ornamental plants, emphasizing their multifunctional potential in green plant protection and environmental management. This provides a new perspective for the next phase of theoretical research and innovative breeding of trichomes in ornamental plants. In the future, it will be possible to cultivate new generations of ornamental plants that possess ecological resilience, economic value, and ornamental appeal, promoting the entry of ornamental plant breeding into a new era characterized by on-demand design, multifunctionality, and intelligent, efficient breeding.

    Research Progress in the Molecular Regulatory Mechanism of Plant Trichome Development
    QIN Zi-lu, SUN Hai-yan, CHEN Ying-nan
    2026, 42(9):  57-69.  doi:10.13560/j.cnki.biotech.bull.1985.2025-1037
    Asbtract ( 741 )   HTML ( 8)   PDF (1161KB) ( 50 )  
    Figures and Tables | References | Related Articles | Metrics

    Plant trichomes are specialized protrusive structures differentiated from plant epidermal cells. As crucial evolutionary features for plants to adapt to the environment over the long term, they play key roles in resisting biotic and abiotic stresses, as well as in the formation of products such as cotton fibers and secondary metabolites in tea leaves. This article systematically reviews the research progress on the molecular regulatory mechanisms of trichome development in herbaceous plants (Arabidopsis thaliana, tomato (Solanum lycopersicum), cotton (Gossypium), and rice (Oryza sativa)) and woody plants (poplar (Populus tremula × P. alba clone), tea (Camellia sinensis), and peach (Prunus persica)). In A. thaliana, the MYB-bHLH-WD40 (MBW) transcription complex constitutes the core conserved module regulating trichome initiation and morphogenesis, achieving precise regulation through positive and negative feedback loops. In tomato, a more complex regulatory network dominated by HD-Zip transcription factors is present. During cotton fiber development, transcription factors such as R2R3 MYB play key roles and functional specific differentiation. As a monocotyledon, the development of trichomes in rice has formed a unique regulatory network that is distinct from that in dicotyledons. Studies on woody plants have shown that poplar and tea still retain part of the conserved MBW core regulatory mechanism, while a novel pathway independent of the complete MBW complex has evolved in the trichome development of peach fruits. By comparatively analyzing the conservation and specificity of trichome regulatory networks across different species, this article provides a theoretical basis for revealing the molecular evolutionary mechanism of plant trichome development and offers potential targets for the molecular breeding improvement of crop stress resistance and economic traits.

    Roles of TIFY Transcription Factors in Plant Growth, Development and Stress Adaptation
    SONG Wen-qing, CHEN Zhi-xiang, LI Yu-qian, WANG Hai-long, XING Guo-fang, ZHANG Jie-wei
    2026, 42(9):  70-81.  doi:10.13560/j.cnki.biotech.bull.1985.2025-0914
    Asbtract ( 939 )   HTML ( 23)   PDF (1440KB) ( 185 )  
    Figures and Tables | References | Related Articles | Metrics

    TIFY transcription factors are a class of regulators unique to plants, which harbor a highly conserved TIF[F/Y]XG motif and can be divided into four sub-families: TIFY, JAZ, PPD and ZML. Driven by advances in plant genomics and functional genomics, TIFY transcription factor genes have been systematically identified in a wide range of plant species, and the size of this gene family varies markedly among different plants. Here we summarize the structural features of TIFY transcription factors and systematically delineate their roles in growth and development (e.g., leaf morphogenesis, floral organ, etc.), hormonal signal transduction (especially jasmonic acid, ABA, etc.), and responses to diverse environmental stresses, including biotic attack as well as cold, drought. Although TIFY proteins have been conclusively implicated in plant growth, development, and stress responses, their precise mechanistic actions remain elusive, and the fine-tuning of their functions by post-translational modifications (e.g., methylation, phosphorylation, and ubiquitination) awaits further dissection. In the future, comparative genomics can be integrated to systematically analyze the collinear blocks and evolutionary trajectories of TIFY genes across different families, genera, and ploidy levels, thereby uncovering their functional differentiation rules. Leveraging structural biology techniques such as X-ray crystallography and cryo-electron microscopy, the three-dimensional structures of TIFY core domains (e.g., TIFY and JAS) can be resolved to pinpoint their interaction interfaces with target proteins and hormonal ligands. Coupled with CRISPR-Cas9-mediated gene editing, this will enable in-depth dissection of TIFY regulatory mechanisms and facilitate directed genetic improvement via genetic-engineering strategies, ultimately providing important candidate genes for breeding next-generation crops with robust stress tolerance and superior high-yield traits.

    Research Progress in the Regulation of Plant Growth, Development, and Stress Responses by Small Peptide Hormones EPFs/EPFLs
    ZHU Yun-tao, DU Yi-fan, ZUO Shi-min, XIONG Ye-hui
    2026, 42(9):  82-92.  doi:10.13560/j.cnki.biotech.bull.1985.2025-1311
    Asbtract ( 1782 )   HTML ( 16)   PDF (1070KB) ( 258 )  
    Figures and Tables | References | Related Articles | Metrics

    Plant stomata are crucial microstructures regulating photosynthesis and transpiration, and their development follows the “one-cell spacing rule” governed by highly programmed molecular signaling pathways. This review summarizes the pivotal roles of the epidermal patterning factors/EPF-like peptides (EPFs/EPFLs) family in plant growth and development, particularly in stomatal patterning. The article systematically elucidates the classification, functions, maturation, and processing of this family, with a focus on analyzing the molecular mechanism by which EPFs/EPFLs act as ligands recognized by the ERECTA/TMM/SERK receptor complex, subsequently activating the MAPK cascade signaling pathway to precisely regulate stomatal development through phosphorylation-mediated degradation of key transcription factors such as SPCH. Furthermore, the review summarizes the biological functions of this family in the growth and development of plants such as Arabidopsis and rice (Oryza sativa), and maize (Zea mays), as well as the potential applications of these peptide hormones in improving crop water use efficiency and stress resistance. It also explores the roles of these peptides in responding to abiotic stresses like drought and salinity by modulating stomatal density and aperture, and their potential mechanisms in regulating stomatal immunity. Finally, the article provides an outlook on future research directions and agricultural applications, highlighting its significant guidance for stable and increased crop yields.

    DnaJ-type Zinc Finger Protein OsDJA10 Positively Regulates Chloroplast Development in Rice
    REN Qiong, ZHONG Jiao, DUAN Yu, QIN Tong, KANG Zhen-hui
    2026, 42(9):  93-106.  doi:10.13560/j.cnki.biotech.bull.1985.2026-0023
    Asbtract ( 705 )   HTML ( 17)   PDF (157675KB) ( 52 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective The function of DnaJ-type zinc finger protein molecular chaperones in rice remains incompletely understood. Using the OsDJA10 gene (LOC_Os08g36140) as a model, this study investigates the molecular mechanisms underlying the albino phenotype in its knockout (KO) lines and the yellowing phenotype in its RNA interference (RNAi) lines. This study also evaluates the high-light tolerance of its overexpression (OE) lines, providing a theoretical reference for breeding stress-resistant rice varieties. Method CRISPR/Cas9 gene editing, RNAi, and Agrobacterium-mediated transformation were employed to generate knockout, knockdown, and overexpression lines, respectively. The biological functions of the OsDJA10 gene were elucidated by measuring photosynthetic pigments, chlorophyll fluorescence, chloroplast ultrastructure, antioxidant enzyme activities, relative water content and relative electrical conductivity of leaves and roots, and growth traits, combined with subcellular localization, RT-qPCR, and transcriptomic analysis. Result OsDJA10 knockout seedlings exhibited a white-leaf lethal phenotype, with near-complete absence of plant pigments, mature chloroplasts, and thylakoid stacks. Expression of genes related to chloroplast structure and development was significantly downregulated, and differentially expressed genes were significantly enriched in photosynthetic pathways. RNAi-treated plants exhibited leaf chlorosis, significantly reduced photosynthetic pigment content compared to wild-type Zhonghua 11, and markedly downregulated Fv/Fm and NPQ. Chloroplast number decreased significantly, volume shrank markedly, thylakoid stacks were remodeled, and expression of chloroplast structure and development-related genes was downregulated. OsDJA10 -overexpressing lines showed significantly reduced plant height, panicle length, and flag leaf length, with no positive effect on yield; however, they exhibited significantly higher tolerance to high-light stress compared to wild-type Zhonghua 11. Conclusion The OsDJA10 gene positively regulates chloroplast development in rice by influencing photosynthetic gene transcription and photosynthetic organ stability, while enhancing tolerance to high-light stress.

    Identification of Lysine Synthesis Pathway Genes and Analysis of the Regulation of AK Gene Variations in Foxtail Millet
    ZHAO Xiong-wei, SHAO Li-tao, LI Meng-qing, LIANG Yi-xuan, ZHANG Jie-ru, CAO Yan-hua
    2026, 42(9):  107-119.  doi:10.13560/j.cnki.biotech.bull.1985.2025-1203
    Asbtract ( 617 )   HTML ( 6)   PDF (5411KB) ( 40 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective Lysine is the first limiting essential amino acid for humans and livestock, and its low content restricts the improvement of nutritional quality in foxtail millet (Setaria italica L.). Elucidating the molecular mechanisms of lysine biosynthesis and metabolism in foxtail millet is essential for providing genetic resources for improving grain nutritional quality. Method The genes involved in the lysine biosynthesis pathway (LBPG) were identified via bioinformatics. Key candidate genes regulating grain lysine accumulation were explored by combining phylogenetic analysis, chromosomal localization, collinearity analysis, expression profiling, candidate gene association analysis, and haplotype analysis. Result The lysine content in foxtail millet grains declined during grain development (S1‒S4), and the variation coefficient of lysine content in natural populations was 36.5%. Based on Kyoto encyclopedia of genes and genomes (KEGG) database annotation and foxtail millet genome information, a total of 15 genes encoding lysine synthesis-related enzymes were identified, belonging to 7 gene families. LBPGs (lysine biosynthesis pathway genes) exhibited tissue-specific and stage-specific expression, with most genes showing down-regulation in the panicle from the S1 to S4 stages. Candidate gene association analysis showed that 30 single nucleotide polymorphisms (SNPs) within four members of the aspartate kinase (AK) family (AK1, AK3, AK4, and AK5) were significantly associated with lysine content (P<0.01). Specifically, accessions carrying the AK3 Hap1 and AK5 Hap1 haplotypes exhibited 17.22% and 12.96% higher lysine content, respectively, than those carrying the Hap2 haplotypes. Protein interaction network and expression correlation analyses indicated that the homoserine kinase (HSK) gene interacted with AK3 and had a significantly positive expression correction (P<0.01). And it may modulate lysine synthesis by regulating the expression of AK3. Conclusion Lysine content in foxtail millet grains decreases as the grain matures. SNPs in AK family genes are key factors influencing lysine variation. Hap1 of AK3 and AK5 are superior haplotypes for high-lysine breeding. Furthermore, the HSK gene likely acts in coordination with AK3 to regulate lysine biosynthesis in foxtail millet grains.

    Construction and Validation of the pOp6/LhG4AtO Expression System in the Embryo and Endosperm of Arabidopsis Seed
    FU Cai-xia, ZHANG Rui-hua, ZHU Yun-jun, LI Jing, YANG Ke, WANG Xuan-peng
    2026, 42(9):  120-127.  doi:10.13560/j.cnki.biotech.bull.1985.2026-0021
    Asbtract ( 877 )   HTML ( 26)   PDF (264291KB) ( 99 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective To construct the pOp6/LhG4AtO expression system for studying gene function in the embryo and endosperm of Arabidopsis seeds, and to validate its feasibility to provide a reliable tool for tissue-specific gene expression. Method Based on the pOp6/LhG4AtO binary transcriptional activation system, previously reported embryo-specific (TWS1) and endosperm-specific (FWA, ESH1) promoters were selected to construct the driver vectors. Meanwhile, a fluorescent reporter gene with enhanced nuclear localization (H2B-Clover) was employed to generate the effector vector. Genetic transformation was performed via Agrobacterium-mediated floral dip method to obtain positive transgenic lines. By crossing the driver lines with the effector line, the tissue-specific expression of the reporter gene was observed in F1 seeds at 2–5 d after pollination, and the expression patterns were compared with publicly available microarray transcriptome data (NCBI GEO; accession number GSE12404). Result The pOp6/LhG4AtO expression system was successfully constructed, and the required independent transgenic lines were obtained, including driver lines (pTWS1::LhG4AtO, pFWA::LhG4AtO, pESH1::LhG4AtO ) and an effector line (pOp6::H2B-Clover). After crossing the driver line with the effector line, green fluorescence signals driven by pTWS1::LhG4AtO, were specifically and continuously observed at high levels in the nuclei of embryos cells only at 3‒5 d after pollination (DAP). Similarly, green fluorescence signals driven by pFWA::LhG4AtO and pESH1::LhG4AtO were observed specifically and continuously at high levels in the nuclei of endosperm cells at 2‒5 DAP after pollination. These results demonstrate that the fluorescence expression patterns driven by the pOp6/LhG4AtO system are highly consistent with published microarray transcriptome data. Conclusion This study established and validated the pOp6/LhG4AtO system for tissue-specific driver gene expression in the embryo and endosperm of Arabidopsis seeds, providing a reliable tool for functional studies of key genes during seed development.

    NtWUN Negatively Regulates Tobacco Trichome Development
    LIU Na-wei, QIAN Meng-ying, ZHANG Hong-ying, WANG Zhao-jun, CUI Hong, YAN Xiao-xiao
    2026, 42(9):  128-136.  doi:10.13560/j.cnki.biotech.bull.1985.2026-0339
    Asbtract ( 752 )   HTML ( 17)   PDF (4656KB) ( 48 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective This study aimed to elucidate the mode of action of the transcription factor NtWUN in mediating jasmonic acid (JA) signaling and to clarify the internal mechanism by which this transcription factor regulates trichome growth and development in tobacco. The findings would provide a theoretical and experimental basis for further dissecting the molecular mechanism underlying JA-mediated development of plant epidermal structures. Method In the common tobacco cultivar K326, multiple approaches including homologous cloning, bioinformatic analysis, subcellular localization assay, and quantitative real-time PCR (RT-qPCR) were adopted to characterize the sequence features and protein structure of the NtWUN gene, determine its subcellular localization properties, and clarify its tissue-specific expression patterns as well as transcriptional responses to methyl jasmonate (MeJA) treatments at varying concentrations. Furthermore, overexpression and knockout lines of NtWUN were generated to functionally validate the biological roles of this gene. Result NtWUN has two homologous sequences, NtWUN-1 and NtWUN-2. The coding region of NtWUN-1 is 630 bp in length, encoding 209 amino acids, while that of NtWUN-2 is 636 bp, encoding 211 amino acids. Phylogenetic analysis indicated that NtWUN-1 is highly homologous to Nicotiana sylvestris, and NtWUN-2 is highly homologous to N. tomentosiformis; both are closely related to homologous genes in Lycium barbarum. Expression pattern analysis showed that both NtWUN-1 and NtWUN-2 were most highly expressed in leaves, followed by trichomes, stems, and flowers, with the lowest expression in roots. Following treatment with different concentrations of MeJA, the relative expression levels of both genes initially increased and then decreased. Both genes were strongly induced by MeJA at 24 h, with expression levels upregulated by 10.2-fold and 11.8-fold, respectively. Subcellular localization results showed that NtWUN-1 and NtWUN-2 were both localized in the nucleus. Observation of trichome morphology and density revealed that the NtWUN overexpression line (OE8) showed 37.5% and 35.7% reductions in long-stalked and short-stalked glandular trichomes, respectively, while the knockout line (KO2) exhibited 50.0% and 57.1% increases in these two trichome types. The trichome types in the above transgenic lines were not affected. Conclusion The transcription factor NtWUN negatively regulates JA-mediated development of long-stalked and short-stalked glandular trichomes in tobacco.

    CsCAD Genes Mediate Lignin Deposition to Regulate Petiole Angle Formation in Cucumber
    QIN Shao-min, MIAO Han, DONG Shao-yun, GUAN Jian-tao, GU Xing-fang, LI Sen, LIU Xiao-ping, ZHANG Sheng-ping
    2026, 42(9):  137-146.  doi:10.13560/j.cnki.biotech.bull.1985.2026-0106
    Asbtract ( 846 )   HTML ( 17)   PDF (17783KB) ( 58 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective To characterize the CAD gene family in cucumber (Cucumis sativus L.) and explore its potential roles in regulating petiole angle formation, providing candidate genes for improving plant architecture. Method Based on the cucumber reference genome CLv4.0, CAD family members were identified using domain-based and homology-based approaches. Their chromosomal distribution, physicochemical properties, gene structures, conserved motifs, phylogenetic relationships, promoter cis-acting elements, and synteny were systematically analyzed. Candidate genes were further screened using multi-tissue transcriptome data. Expression patterns were analyzed by RT-qPCR in the adaxial petiole base and shoot-tip leaves of cucumber materials with contrasting petiole angles. Lignin content was measured, and subcellular localization of selected proteins was determined. Result A total of 22 CAD genes were identified in the cucumber genome and unevenly distributed across seven chromosomes, with three pairs of tandem duplications detected. Phylogenetic analysis classified these genes into four subgroups, among which subgroup II showed significant expansion. Promoter analysis revealed that CsCAD genes were enriched in hormone-responsive and stress-related cis-elements. Tissue expression analysis indicated that several CsCAD genes were highly expressed in mechanically relevant tissues. Further analysis showed that CsCAD13 and related genes were highly expressed in the adaxial petiole base of small-angle materials, whereas CsCAD19 and CsCAD14 exhibited higher expression in shoot-tip leaves of large-angle materials. Lignin content was significantly higher in the adaxial petiole base of small-angle materials. Subcellular localization revealed distinct intracellular distribution patterns among CsCAD proteins. Conclusion The cucumber CAD gene family exhibits both conservation and expansion with functional divergence. Some CsCAD genes may regulate petiole angle formation by modulating lignin accumulation in the adaxial petiole base or affecting shoot-tip tissue development, providing potential targets for cucumber plant architecture improvement. This study is the first to link the CAD gene family with petiole angle, a key trait of plant architecture in cucumber.

    Integrated Transcriptome and Metabolome Analysis Reveals Key Regulatory Pathways Underlying Delayed Female Corolla Opening in Cucumber
    FAN Li-jin, SONG Xiao-fei, LI Xiao-li, YAN Li-ying, XIE Yang
    2026, 42(9):  147-156.  doi:10.13560/j.cnki.biotech.bull.1985.2026-0024
    Asbtract ( 640 )   HTML ( 17)   PDF (3268KB) ( 80 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective To explore the molecular mechanism by which exogenous growth regulators regulate the key commercial trait of “persistent corolla and erect fruit spines” in production, and to provide a theoretical basis for further improving the fresh eating quality of cucumbers through molecular breeding. Method This study compared the gene expression and metabolite changes of cucumber female flower corollas under dipping and non-dipping treatments at different developmental stages using transcriptome and metabolome analyses. Key genes and metabolites regulating the delayed opening of cucumber female flower corollas were screened out, and the molecular regulatory mechanism of delayed shedding of cucumber female flower corollas after treatment was preliminarily analyzed. Result The results showed that 3 508, 3 581, and 5 752 differentially expressed genes (DEGs) were identified in the three comparison groups of nDF_0d vs DF_0d, nDF_2d vs DF_2d, and nDF_4d vs DF_4d, respectively. These genes were significantly enriched in the plant hormone signal transduction pathway (csv04075), phenylpropanoid biosynthesis pathway (csv00940), and phenylalanine metabolism pathway (csv00360). Genes related to auxin, including AUX28 (Csa07g1708), IAA14 (Csa02g0970), GH3.1 (Csa06g2748), and ARF19 (Csa02g0003), may play a key role in regulating the delayed opening of cucumber flower corollas. Metabolome analysis further indicated that secondary metabolites such as phenolic acids, ferulic acid derivatives, and flavonoids accumulated significantly in the corresponding treatments, especially phenylpropanoids and flavonoids, which were closely related to the continuous opening of cucumber flower corollas and may be related to their roles in cell wall elasticity, antioxidant activity, and hormone regulation. Conclusion It is revealed that the auxin-dominated response induced by flower dipping delays corolla opening through antagonism with ethylene signaling, whereas the non-dipped treatment promotes corolla abscission via an ethylene-centered regulatory pathway.

    Identification of the Cucumber CsHXKs Gene Family and Regulation of Floral Organ Sugar Accumulation by CsHKL1.2
    SANG Zhi-peng, HOU Dong, WANG Hui-ting, YUE Hong-zhong, LI Ya-li, XIE Jian-ming, LU Wen, XU Zhao-tai
    2026, 42(9):  157-168.  doi:10.13560/j.cnki.biotech.bull.1985.2025-1396
    Asbtract ( 753 )   HTML ( 17)   PDF (19280KB) ( 62 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective To study the sequence characteristics and expression patterns of hexokinase gene family members (CsHXKs) in cucumber (Cucumis sativus L.), and verify the function of CsHKL1.2 in sugar accumulation in cucumber floral organs, so as to provide a theoretical basis and genetic resources for the regulation of sugar metabolism in floral organs and quality breeding of cucumber. Method Genome-wide identification and comprehensive bioinformatics analysis were performed on CsHXKs in cucumber. The expression profiles of CsHXKs in different tissues, various parts of floral organs, and under abiotic stress conditions were detected via reverse transcription quantitative polymerase chain reaction (RT-qPCR). Subcellular localization assay and virus-induced gene silencing (VIGS) technology were used to verify the subcellular location and biological function of the candidate gene. Result The cucumber CsHXKs gene family comprises six members, which are distributed on four chromosomes. The encoded proteins range from 371 to 547 amino acids in length, with molecular weights of 40.4‒59.6 kD. Phylogenetic analysis divided these members into six subgroups, and members within the same subgroup shared similar gene structures and conserved motifs. Cis-acting element analysis showed that the promoters of CsHXKs contain multiple elements related to light response, low temperature, drought, hormone regulation and defense response. Under abiotic stress, CsHXKs genes exhibited significantly induced expression. CsHXK3 and CsHKL3 exhibited high expressions in the roots, while CsHXK1, CsHXK2, CsHKL1.1 and CsHKL1.2 displayed flower-specific expression patterns, among which CsHKL1.2 showed the highest expression in male flower nectaries. CsHKL1.2 was localized in chloroplasts. After VIGS-mediated silencing of CsHKL1.2, the contents of glucose, fructose and sucrose in floral organs including anthers, male flower nectaries, stigmas, female flower nectaries and ovaries significantly increased, while the activities of soluble acid invertase, cytosolic neutral invertase, phosphofructokinase, sucrose synthase, sucrose phosphate synthase and hexokinase in these tissues were significantly downregulated. Conclusion Different members of the cucumber CsHXKs gene family may exert distinct biological functions. Among them, CsHKL1.2 participates in sugar accumulation in floral organs by regulating the activities of sugar metabolism-related enzymes, which preliminarily verifies the function of CsHKL1.2 in sugar metabolism of cucumber floral organs.

    Cloning and Flowering Regulation Mechanism of BoFLC3 in Broccoli
    ZHANG Jing, LI Yuan-yuan, WANG Yan, JIANG Ya-jie, YANG Han-bing, CHAI Wen-chen, HUO Chen-si, LUO Dan, YAN Shi-jiang
    2026, 42(9):  169-177.  doi:10.13560/j.cnki.biotech.bull.1985.2025-1354
    Asbtract ( 832 )   HTML ( 19)   PDF (4182KB) ( 37 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective FLOWERING LOCUS C (FLC) is one of the key genes regulating flowering in plants. By cloning BoFLC3 from broccoli and characterizing its function, this study aimed to provide insights into the molecular regulatory mechanism underlying the floral transition in broccoli. Method Using broccoli as the experimental material, BoFLC3 was cloned by homology-based cloning. Its sequence characteristics, conserved domains, and phylogenetic relationships were analyzed using bioinformatics tools. The expression profiles of BoFLC3 in different tissues and under various treatments were detected by RT-qPCR to determine its expression specificity. A subcellular localization vector was constructed and transiently overexpressed in tobacco to determine the subcellular localization of the BoFLC3 protein. Furthermore, BoFLC3 was heterologously overexpressed in Arabidopsis thaliana, and its role in flowering was analyzed by comparing bolting and flowering phenotypes between transgenic and wild-type plants. Result The full-length cDNA of BoFLC3 is 594 bp, encoding a protein of 197 amino acids. The deduced BoFLC3 protein contains a typical MADS domain and a K-box domain and was localized in the nucleus. Phylogenetic analysis showed that BoFLC3 shares high homology with FLC from cabbage (Brassica oleracea var. capitata). Expression pattern analysis revealed that BoFLC3 transcript levels were relatively high in mature leaves and shoot tips, and significantly decreased in shoot tips after low-temperature treatment. Heterologous overexpression of BoFLC3 in A. thaliana significantly delayed bolting and flowering time. In the overexpression lines, the transcript levels of the flowering-promoting genes AtFT, AtLFY, AtAP1, and AtSPL were downregulated, whereas the expression of the flowering repressor gene AtSVP was upregulated. Conclusion BoFLC3 plays a critical role in the flowering process. Its heterologous overexpression significantly delayed bolting and flowering, indicating that this gene functions as a negative regulator in the floral induction pathway.

    Auxin Induces and Regulates the Expressions of PagHAM4a/PagHAM4b and Affects the Secondary Xylem Development in Poplar
    LIU Ran, ZHAO Pan, ZHOU Xin-yi, SU Yu-ting, ZHENG Shu-ya, GAO Hong-bo, GUO Hui-hong
    2026, 42(9):  178-185.  doi:10.13560/j.cnki.biotech.bull.1985.2025-1092
    Asbtract ( 151 )   HTML ( 27)   PDF (10410KB) ( 134 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective Auxin plays a critical role in plant growth and development. This study aims to explore the regulatory role of exogenous auxin (IAA) on the expressions of PagHAM4a and PagHAM4b in 84K poplar (Populus alba × Populus glandulosa), as well as its effect on the secondary xylem development in poplar, providing a basis for exploring the interaction between transcription factors and IAA in the development of secondary xylem in trees. Method Using 84K poplar as experimental material, exogenous IAA was applied. RT-qPCR technology was employed to detect the expressions of PagHAM4a and PagHAM4b. By constructing expression vectors for two genes: one vector containing a GFP reporter driven by the auxin-responsive promoter DR5 and a GUS reporter driven by the PagHAM4a-specific promoter; the other vector containing the DR5-driven GFP reporter and the PagHAM4b-specific promoter-driven GUS reporter, to investigate the relationship between the expression regions of the PagHAM4a/PagHAM4b and auxin distribution. Simultaneously, through measurement and statistical analysis, combined with paraffin sectioning techniques, the external morphology and the microscopic structure of stem secondary xylem in IAA-treated wild-type 84K poplar, PagHAM4a- and PagHAM4b- overexpressing plants (PagHAM4a-OE and PagHAM4b-OE) were observed. Result RT-qPCR result indicated that exogenous IAA application significantly up-regulated the expressions of both PagHAM4a and PagHAM4b. Dual reporter gene assays revealed that expression regions of the PagHAM4a and PagHAM4b in the secondary stem of 84K poplar coincided with the distribution of auxin. Phenotypic analysis showed that, compared with untreated plants, the IAA application significantly increased plant height, leaf area, stem diameter, and internode number in 84K poplar, PagHAM4a-OE and PagHAM4b-OE plants, and also resulted in a significant increase in the width and cell layer number of both the secondary xylem and the cambium in the stems, consistent with the upregulation trend of PagHAM4a and PagHAM4b expression. Conclusion The application of exogenous IAA promotes the expressions of PagHAM4a and PagHAM4b genes and the development of secondary xylem in the stems of 84K poplar. PagHAM4a and PagHAM4b participate in regulating the development of secondary xylem through the auxin signaling pathway.

    Cloning and Functional Analysis of Gene PagRAX2_16G and Its Promoter from Poplar
    ZHENG Shu-ya, SU Yu-ting, HE Yu-mei, ZHAO Pan, ZHOU Xin-yi, LIU Ran, LIU Ping-li, GUO Hui-hong
    2026, 42(9):  186-195.  doi:10.13560/j.cnki.biotech.bull.1985.2025-1259
    Asbtract ( 142 )   HTML ( 5)   PDF (15708KB) ( 79 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective R2R3-MYB transcription factors play extensive regulatory roles in plant growth and development. The physiological function of PagRAX2_16G, an R2R3-MYB member in ‘84K’ poplar (Populus alba × Populus glandulosa ‘84K’), was investigated to provide a scientific theoretical basis for elucidating the molecular mechanisms underlying secondary xylem formation in ‘84K’ poplar. Method Using ‘84K’ poplar as the experimental material, homologous cloning was adopted to obtain PagRAX2_16G and its promoter, and they were subsequently subjected to sequence analysis. Detection methods of RT-qPCR and gene-specific promoter-driven GUS reporter gene expression were used to analyze the expression pattern of PagRAX2_16G. The pBI121-35S::PagRAX2_16G overexpression vector was constructed, transformed into ‘84K’ poplar, and then PagRAX2_16G-overexpressed positive plants were obtained through PCR and GUS detection. Using the wild-type ‘84K’ poplar as a control, external morphological traits such as plant height, stem diameter, root length, and root diameter of PagRAX2_16G overexpression plants were measured and statistically analyzed. Paraffin sectioning techniques were employed to further observe the internal tissue structures of stems and roots. Result PagRAX2_16G coding region is 999 bp, encoding 332 amino acids. The length of PagRAX2_16G promoter is 1 648 bp and contains essential promoter elements such as the TATA-box transcription initiation core element. The RT-qPCR results showed that the expression of PagRAX2_16G was significantly higher in secondary stems, old roots, and mature leaves than in primary stems, young roots and young leaves, and with the highest expression observed in old roots. GUS staining results revealed that PagRAX2_16G was primarily expressed in the vascular tissues of organs; in stems and roots undergoing secondary growth, PagRAX2_16G was expressed in the cambium and adjacent derived vascular cells. Phenotype analysis indicated that compared to the wild-type ‘84K’ poplar, PagRAX2_16G overexpression plants exhibited significant increases in plant height, stem diameter, root length, and root diameter; moreover, the width and number of secondary xylem layers, the number of cambium cell layers, and the area of vessel and fiber cells in both stems and roots were significantly increased. Conclusion PagRAX2_16G positively regulates the differentiation of the cambium into secondary xylem and the expansion of xylem cells in ‘84K’ poplar, playing a crucial role in the formation of secondary xylem in the roots and stems.

    Genome-wide Identification of the MYB Transcription Factor Family in Camellia oleifera and Functional Analysis of CoMYB107 in Stamen Development
    TAN Shu, SHEN Hong-jian, GAO Xiao-lei, YIN Qian, ZOU Feng
    2026, 42(9):  196-209.  doi:10.13560/j.cnki.biotech.bull.1985.2026-0115
    Asbtract ( 84 )   HTML ( 10)   PDF (14926KB) ( 69 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective To identify members of the MYB gene family in Camellia oleifera and analyze the molecular regulatory network of its anther development, providing theoretical support for elucidating the reproductive development mechanism of C. oleifera. Method Based on the C. oleifera genome data, members of the MYB gene family were identified using bioinformatics methods, and their sequence characteristics, physicochemical properties, and evolutionary relationships were analyzed, and subcellular localization was predicted. Using transcriptome data and RT-qPCR technology, the expression patterns of candidate MYB genes in different tissues and at different developmental stages were investigated, key genes were screened, and heterologous overexpression of genes was performed using the tobacco leaf disc method to verify the functions of candidate genes. Result A total of 137 MYB genes were identified from the C. oleifera genome, with amino acid lengths ranging from 102 to 1 752 aa, distributed on 45 chromosomes, and the majority of members were predicted to localize in the nucleus. There were 55 segmental duplication events, involving 44 valid gene pairs. Among these, 38 gene pairs were under purifying selection, and 5 gene pairs were under positive selection. There were 95 collinear gene pairs with Arabidopsis. Phylogenetic analysis indicated that the MYB family in C. oleifera and Arabidopsis could be classified into 26 subfamilies. Promoter cis-acting elements were mainly associated with light response, hormone response, and stress response, with hormone-related cis-elements mainly including gibberellin, abscisic acid, and jasmonic acid elements. Transcriptome data and RT-qPCR expression pattern analysis showed that 8 genes exhibited specifically high expression in anthers. In addition, protein interaction network prediction suggested that CoMYB107, CoMYB55, and CoMYB136 may be involved in a specific protein interaction regulatory network; overexpression of CoMYB107 in tobacco significantly reduced pollen viability, elongated filament length, and delayed anther dehiscence. Conclusion CoMYB107 may regulate stamen development through the GA-JA signaling pathway, which manifests as promoting filament elongation, delaying anther dehiscence, and decreasing pollen viability.

    Functional Study of SmHD-ZIP25 and SmHD-ZIP29 Genes in Flower Development of Sapindus mukorossi
    CHEN Ning-yi, WU Wen-tong, ZHAO Guo-chun, JIA Li-ming, CHEN Zhong
    2026, 42(9):  210-220.  doi:10.13560/j.cnki.biotech.bull.1985.2026-0174
    Asbtract ( 68 )   HTML ( 8)   PDF (6077KB) ( 52 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective To investigate the regulatory roles of SmHD-ZIP25 and SmHD-ZIP29 in Sapindus mukorossi flower development and sexual differentiation, and to provide valuable reference genes for its molecular design breeding. Method Using S. mukorossi as a model plant, two members of the HD-ZIP I subfamily, SmHD-ZIP25 and SmHD-ZIP29, were cloned. These genes were subjected to sequence alignment, phylogenetic analysis, subcellular localization, and expression pattern analysis. Their functions were further investigated through heterologous transformation in Arabidopsis. Result Sequence alignment and phylogenetic tree analysis revealed that SmHD-ZIP25 and SmHD-ZIP29 possessed complete Homeodomain and Leucine Zipper domains and exhibited high homology with the sex differentiation-related persimmon MeGI gene. Subcellular localization studies indicated that both proteins were localized in the nucleus. Expression pattern analysis revealed distinct expression patterns of SmHD-ZIP25 and SmHD-ZIP29 during S. mukorossi male and female flower development, while they showed similar expression levels in root, stem, and leaf tissues. Compared with wild-type Arabidopsis, overexpression of either SmHD-ZIP25 or SmHD-ZIP29 exhibited phenotypes including premature flowering, rosette leaf curling, and pod developmental abnormalities, significantly impairing floral organ development. Specifically, pistils exhibited relative elongation while stamen development was suppressed (shortened anthers, pollen abortion, and severely reduced pollen viability). Cytological observations further confirmed abnormal anther sac development and collapsed pollen grain morphology in transgenic plants. RT-qPCR analysis indicated that these two genes synergistically regulated female-promoting and male-suppressing developmental processes by upregulating the expression of the flowering integrator AtFT and of the carpel developmental genes AtSHP2 and AtCRC, while simultaneously suppressing the expression of the key jasmonic acid signaling pathway gene AtCOL1 and its downstream male organ developmental core factors AtAMS and AtMYB21. Conclusion SmHD-ZIP25 and SmHD-ZIP29 are key factors involved in regulating floral organ developmental balance, providing new theoretical support for elucidating the molecular mechanisms underlying S. mukorossi flower development and sexual differentiation.

    HrβVPE1 Regulates Seed Germination in Hippophae rhamnoides by Controlling Degradation of Outer Endosperm Cells
    CHENG Zi-yi, WANG Pei-rong, ZHONG Zi-ning, WEI Ming, WU Guo-qiang
    2026, 42(9):  221-230.  doi:10.13560/j.cnki.biotech.bull.1985.2025-1299
    Asbtract ( 100 )   HTML ( 12)   PDF (28897KB) ( 57 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective This study aimed to investigate the effects of the Hippophae rhamnoides vacuolar processing enzyme gene HrβVPE1 on programmed cell death (PCD) and starch degradation in outer endosperm cells during seed germination, thereby providing a theoretical basis for clarifying its molecular regulatory mechanism in seed germination. Method The HrβVPE1 gene was cloned from Hippophae rhamnoides seeds. Bioinformatics approaches were adopted to analyze the nucleotide and amino acid sequences of HrβVPE1, followed by multiple sequence alignment and phylogenetic tree construction. Quantitative real-time PCR (RT-qPCR) was employed to detect the expression patterns of HrβVPE1 at different seed germination stages. Agrobacterium-mediated transient transformation was conducted on Nicotiana benthamiana leaves to determine the subcellular localization of HrβVPE1. Virus-induced gene silencing (VIGS) was used to downregulate HrβVPE1 expression in H. rhamnoides seeds. Iodine-potassium iodide (I2-KI) staining, DAPI (4′,6-diamidino-2-phenylindole) staining, and double-probe staining with FDA (fluorescein diacetate) and FM4-64 were performed to observe the impacts of HrβVPE1 silencing on starch degradation, vacuole dynamics, nuclear morphology, plasma membrane integrity, and cell viability of outer endosperm cells. Additionally, an HrβVPE1 overexpression vector was constructed and transformed into Arabidopsis thaliana. The seed germination rate of transgenic A. thaliana was calculated, and RT-qPCR was used to detect the expression levels of multiple PCD-related genes in overexpressing plants. Result The full-length cDNA of HrβVPE1 was 1 482 bp, encoding a polypeptide of 493 amino acids. Phylogenetic analysis revealed that HrβVPE1 had a close genetic relationship with vacuolar processing enzymes from woody plants such as Populus and Salix species. HrβVPE1 was localized to the vacuolar membrane. RT-qPCR analysis showed that HrβVPE1 exhibited high expression levels in the middle and late stages of seed germination. Silencing of HrβVPE1 significantly delayed starch degradation, inhibited the fusion of protein storage vacuoles (PSVs) and the degradation of cell nuclei in outer endosperm cells, blocked the PCD process, and prolonged cell viability. Overexpression of HrβVPE1 in A. thaliana promoted seed germination, upregulated the expression of positive PCD regulatory genes AtCEP1, AtXCP2, AtMC9, and downregulated the expression of negative PCD regulatory genes AtMOD1, AtDAD2. Conclusion HrβVPE1 plays a critical role in H. rhamnoides seed germination by regulating PCD processes in outer endosperm cells and thereby mediating starch degradation.

    Overexpression of FvBBX22 from Fragaria Vesca Promotes Anthocyanin Synthesis and Delays Flowering Time in Arabidopsis thaliana
    DONG Xiang-xiang, HOU Wei-wei, MIAO Bai-ling, CHEN Juan-juan, LI Liang-jie, ZHAI Min, ZHU Qing-song, LIU Song-hu
    2026, 42(9):  231-237.  doi:10.13560/j.cnki.biotech.bull.1985.2026-0204
    Asbtract ( 189 )   HTML ( 20)   PDF (4176KB) ( 71 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective BBX transcription factors play important roles in plant growth and development, and exploring the biological functions of FvBBX22 provides genetic resources for strawberry molecular breeding. Method Using Fragaria vesca ‘Ruegen’ as experimental material, the FvBBX22 gene was cloned by RT-PCR. The physicochemical properties and structural characteristics of its protein, as well as its phylogenetic tree, were analyzed using bioinformatics methods. An overexpression vector for the FvBBX22 gene was constructed, and transgenic Arabidopsis plants were obtained via the floral dip method. The flowering phenotype of transgenic Arabidopsis was observed, and anthocyanin content in leaves was measured. The expression levels of genes related to anthocyanin biosynthesis and flowering pathways were detected by RT-qPCR. Additionally, the tissue-specific expression pattern of FvBBX22 in Fragaria vesca was analyzed. Result The full-length CDS of FvBBX22 was 864 bp, encoding 287 amino acids. It contained two conserved B-box domains and belonged to subgroup Ⅳ of the BBX family. Phylogenetic analysis revealed that the BBX22 proteins from F. vesca and Rubus argutus (of the Rosaceae family) are closely related. Tissue-specific expression analysis showed that FvBBX22 is expressed in all tissues of F. vesca, with the highest expression in stems, followed by leaves. In Arabidopsis plants overexpressing FvBBX22, leaves appeared light purple, and anthocyanin content was significantly higher than that in wild-type Arabidopsis. Analysis of the expression of genes involved in the anthocyanin biosynthesis pathway revealed significantly elevated levels of AtCHS, AtCHI, AtF3H, AtDFR, AtANS, and AtUF3GT. However, the flowering time of transgenic Arabidopsis was delayed. Analysis of the expression of genes involved in the flowering pathway revealed significantly reduced levels of AtCO, AtFT, AtFUL, and AtLFY. Conclusion FvBBX22 promotes anthocyanin accumulation and delays flowering time in Arabidopsis.

    Cloning and Functional Analysis of LaCKX1 Gene Related to Regulation of Floret Number in Lavandula angustifolia
    YUE Li-ping, WANG Ai-fan, WANG Shan, LI Xue-long, CHEN Yu-xiang, SU Xiu-juan
    2026, 42(9):  238-247.  doi:10.13560/j.cnki.biotech.bull.1985.2026-0310
    Asbtract ( 89 )   HTML ( 15)   PDF (20476KB) ( 62 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective Cytokinin oxidase/dehydrogenase (CKX) irreversibly degrades cytokinin (CK) and plays a key regulatory role in plant flower bud differentiation. This study explored the function of the LaCKX1 gene during Lavandula angustifolia spike development, providing a theoretical basis for revealing the regulatory mechanism of the cytokinin signaling pathway on floret number formation in L. angustifolia. Method The LaCKX1 gene was cloned from the flower spike cDNA of L. angustifolia cultivar ‘Xinnongxun No.1’. Its protein physicochemical properties and phylogenetic relationships were analyzed using bioinformatics methods. Subcellular localization of the LaCKX1 protein was determined by transient expression in Nicotiana benthamiana. The expression levels of LaCKX1 in different L. angustifolia varieties, tissues, and spike developmental stages were examined by real-time quantitative PCR (RT-qPCR). The function of LaCKX1 and its effect on endogenous CK content were verified through genetic transformation in Arabidopsis thaliana and L. angustifolia. Result The LaCKX1 gene (coding sequence of 1 575 bp, encoding 524 amino acids) was successfully cloned, and its encoded protein was localized to the cell membrane. LaCKX1 exhibited a distinct tissue-specific expression pattern, with high transcript levels in flower spikes, particularly during the early stages of flower spike development. Its expression was significantly higher in the low-grain cultivar than in the high-grain cultivar at the S1 stage. Furthermore, LaCKX1 overexpression in Arabidopsis resulted in decreased endogenous CK content, leading to phenotypic changes including longer roots, reduced plant height, and fewer flowers. Similarly, LaCKX1 overexpression reduced CK content in L. angustifolia leaves, whereas gene silencing increased CK content in newly formed leaves. Conclusion LaCKX1 may negatively regulate CK biosynthesis in L. angustifolia, thereby participating in the regulation of its flower spike development.

    Effects of Phosphate-solubilizing Bacterium C9 on the Growth, Development, and Medicinal Components of Safflower
    ZHAO Ya, FEIRUOLA Palihati, WEN Xin-rong, MA Wei, SUN Ke-xin, QIN Shu-wei, SUN Bao-ming, LIU Yue, CAO Ai-ping
    2026, 42(9):  248-261.  doi:10.13560/j.cnki.biotech.bull.1985.2026-0017
    Asbtract ( 110 )   HTML ( 12)   PDF (126448KB) ( 39 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective This study aimed to investigate the phosphate-solubilizing characteristics of a highly efficient phosphate-solubilizing bacterium isolated from the rhizosphere soil of safflower (Carthamus tinctorius L.), as well as its regulatory effects on safflower growth, accumulation of active components, and the rhizosphere microenvironment. The goal was to provide a scientific basis for improving sustainable and high-efficiency safflower cultivation. Method Rhizosphere soil of C. tinctorius was used to screen for dominant phosphate-solubilizing strains on inorganic phosphorus selective medium. The colonization ability of the selected strain C9 was evaluated using resistant strain markers. The strain was further characterized by physiological and biochemical analysis, phosphate solubilization assays, growth curve fitting, and 16S rDNA molecular identification. Pot experiments were conducted using three safflower varieties with white, yellow, and red flowers. Bacterial fertilizer was applied via root irrigation, and plant biomass, major active components in the florets, physicochemical properties of the rhizosphere soil, and plant growth-promoting indexes were dynamically monitored. Result A highly efficient phosphate-solubilizing bacterium, designated C9, was isolated from safflower rhizosphere soil and identified as the Gram-negative bacterium Pseudomonas fluorescens. Strain Rif-C9 showed strong solubilizing activity against calcium phosphate and zinc phosphate, and the amount of phosphate solubilized was negatively correlated with a decrease in culture medium pH. Pot experiments demonstrated that strain Rif-C9 stably colonized the safflower rhizosphere and significantly promoted the growth of all three flower-color varieties (white, yellow, and red). Specifically, the number of effective fruiting heads per plant increased by 28.24%, 37.36%, and 26.98%, respectively. Meanwhile, the contents of hydroxysafflor yellow A (HSYA) in the florets increased by 51.5%, 34.7%, and 13.4%, and the contents of kaempferol (KF) increased by 183.3%, 300.0%, and 133.3%, respectively, for the white, yellow, and red flower varieties. Application of the Rif-C9-based bacterial fertilizer led to a decrease in rhizosphere soil pH and significant increases in total nitrogen, organic matter, and available phosphorus contents by 7.64%–18.56%, 15.74%–29.94%, and 4.34%–8.32%, respectively. Furthermore, strain Rif-C9 was capable of secreting indole-3-acetic acid (IAA), which synergistically improved the rhizosphere microecology, thereby promoting safflower growth and the accumulation of active components. Conclusion P. fluorescens Rif-C9 possesses highly efficient phosphate-solubilizing capacity. It significantly promotes safflower growth and development, enhances the content of medicinal components, and improves soil fertility by acidifying the rhizosphere microenvironment, releasing soluble phosphorus, and secreting IAA.

    Design Strategies of sgRNA and Its Expression and Application in Filamentous Fungi
    YANG Jia-ni, WU Tao, ZHANG Hong-yang, HUANG Bing-guang, LU Min, HE Jia-jie, RUAN Hai-hua
    2026, 42(9):  262-275.  doi:10.13560/j.cnki.biotech.bull.1985.2025-1268
    Asbtract ( 1413 )   HTML ( 12)   PDF (13710KB) ( 98 )  
    Figures and Tables | References | Related Articles | Metrics

    Filamentous fungi possess unique morphological and genetic features that hinder large-scale and precise genome modifications using conventional genetic tools. Recently, the CRISPR-Cas9 system has become a powerful approach for fungal genome engineering owing to its structural simplicity, operational flexibility, and cost-effectiveness. As the key determinant of targeting efficiency and specificity, single-guide RNA (sgRNA) plays a central role in the performance of CRISPR-Cas9 and its derivatives. This review summarizes current strategies for sgRNA design, construction, and expression in filamentous fungi, and outlines its applications in functional gene analysis, metabolic engineering, and industrial strain development. Despite its great potential, the review points out that CRISPR-Cas9 editing in filamentous fungi often suffers from low efficiency and off-target effects, primarily due to suboptimal sgRNA design, poor transcriptional activity, and host-dependent DNA repair mechanisms. Finally, the review discusses the optimization approaches and future applications of sgRNA, aiming to facilitate the establishment of efficient and reliable sgRNA-based gene editing platforms for diverse filamentous fungal species.

    Mechanisms and Applications of Bile Acids in Regulating Adipose Tissue Function and Lipid Metabolism
    TONG Xin, JIANG Xian-zhe, WANG Bing
    2026, 42(9):  276-285.  doi:10.13560/j.cnki.biotech.bull.1985.2026-0004
    Asbtract ( 160 )   HTML ( 12)   PDF (4415KB) ( 352 )  
    Figures and Tables | References | Related Articles | Metrics

    Bile acids, as important signaling molecules in vertebrates, primarily regulate adipocyte function in tissues and organs such as the intestine, liver, and adipose tissue through the activation of bile acid receptors, including the farnesoid X receptor (FXR) and G protein-coupled bile acid receptor 1 (TGR5). Through these pathways, bile acids promote fatty acid catabolism and contribute to the maintenance of glucose and lipid metabolic homeostasis. Recent studies have shown that bile acids possess therapeutic potential in lipid metabolism-related disorders, including obesity, diabetes, and fatty liver disease. In particular, they have demonstrated marked effects in promoting the browning of white adipose tissue, enhancing thermogenesis, improving insulin sensitivity, and alleviating obesity and obesity-associated inflammatory disorders. In addition, interactions between bile acids and the gut microbiota play a pivotal role in the regulation of energy balance and lipid metabolic health and have shown effective regulatory functions in healthy livestock and poultry production. Therefore, this review focuses on the metabolic roles of bile acids in adipose tissue and systematically summarizes the key signaling pathways and molecular mechanisms through which bile acid signaling regulates adipose metabolism in different tissues in vivo, aiming to provide new insights and strategies for the study and targeted intervention of adipose metabolic diseases and fat deposition in both humans and animals.

    Screening for TaXI-Ⅳ Interacting Proteins in Wheat and Validation of Its Interaction with TaHRLI-4D
    LIU Yang, BAI Yi-fan, CHEN Wei, ZHOU Jing-jing, CAI Hua, SI Hong-qi
    2026, 42(9):  286-296.  doi:10.13560/j.cnki.biotech.bull.1985.2025-0993
    Asbtract ( 115 )   HTML ( 19)   PDF (5150KB) ( 72 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective The wheat xylanase inhibitor TaXI-Ⅳ plays an important role in wheat resistance to Fusarium head blight. It can inhibit both the degradation of cell wall xylan and the cell necrosis induced by Fusarium gramineum xylanase. Screening TaXI-Ⅳ-interacting proteins will provide insights into its molecular regulatory mechanisms during wheat defense against F. graminearum infection, as well as support the discovery of disease resistance-related genes in wheat. Method Bioinformatic analysis and subcellular localization were conducted for the TaXI-Ⅳ protein. The bait vector for TaXI-Ⅳ was constructed using homologous recombination and subsequently tested for functionality and self-activation. TaXI‑Ⅳ‑interacting proteins were screened by yeast two-hybrid (Y2H) assay and verified through yeast retransformation, luciferase complementation (LCA), and bimolecular fluorescence complementation (BiFC) assays. RT‑qPCR was performed to analyze the expressions of the corresponding interacting‑protein genes after F. graminearum infection. Furthermore, transgenic Arabidopsis thaliana lines were then generated and inoculated with F. graminearum via leaf injection to assess disease resistance. Result TaXI-Ⅳ was localized to the plasma membrane and/or cell wall. The recombinant bait vector pBT3N-TaXI-Ⅳ showed no auto-activation in the yeast strain NMY51 and produced functional protein, confirming its suitability for cDNA library screening. A total of 23 proteins that interacted with TaXI-Ⅳ were obtained by the split-ubiquitin membrane yeast two-hybrid system. These proteins were involved in diverse biological processes in plants, including transcriptional regulation, stress response, biotic defensive reaction, oxidative stress response. Notably, TaXI‑Ⅳ interacted with the hypersensitive response-like lesion-inducing protein TaHRLI‑4D, as demonstrated in both yeast and plant systems. The expression of TaHRLI-4D was induced by F. graminearum infection, and its overexpression in A. thaliana enhanced plant resistance to the pathogen. Conclusion This study screened 23 positive TaXI-Ⅳ-interacting proteins, including the pathogenesis-related protein TaNLTP-4B (non-specific lipid transfer protein) and the reactive oxygen metabolism-related protein TaTrx-4A (thioredoxin). It was further verified that the HR-like lesion inducing protein gene TaHRLI-4D participates in the wheat defense response against F. graminearum infection.

    Bioinformatics Analysis and Salt Tolerance Study of the Peanut Transcription Factor AhZHD9
    REN Wen-bin, CHEN Deng-ke, WU Cui-cui
    2026, 42(9):  297-305.  doi:10.13560/j.cnki.biotech.bull.1985.2026-0315
    Asbtract ( 64 )   HTML ( 10)   PDF (64093KB) ( 44 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective To identify and characterize the structural features of the peanut ZHD transcription factor AhZHD9 and elucidate its function in salt stress response, thereby exploring its potential role in regulating plant salt tolerance and providing a theoretical basis for understanding the molecular mechanisms of peanut ZHD transcription factors in stress response and for molecular breeding of salt-tolerant crops. Method Using peanut AhZHD9 as the target gene, bioinformatics approaches were employed to analyze its protein structural features, interacting proteins, and promoter cis-acting elements, followed by subcellular localization analysis. The expression pattern of AhZHD9 under salt stress was detected by RT-qPCR. AhZHD9-overexpressing Arabidopsis lines were constructed, and salt tolerance was evaluated by measuring chlorophyll and MDA contents, SOD, CAT, and POD activities, as well as plant phenotypes. Result The AhZHD9 protein contains typical zinc finger (ZF) and homeodomain (HD) domains, classifying it as a member of the ZHD transcription factor family. Protein structure prediction revealed that AhZHD9 exhibits a structural pattern of “ordered domains and disordered regulatory regions”. Protein-protein interaction prediction indicated that AhZHD9 may interact with proteins containing bHLH, zf-CW, MBD, REF, and Senescence_reg domains. Promoter cis-acting element analysis revealed that the AhZHD9 promoter region contains multiple elements related to abiotic stress and hormone signaling. Subcellular localization analysis showed that AhZHD9 protein is predominantly localized in the nucleus. Expression analysis demonstrated that AhZHD9 expression was significantly up-regulated under salt stress treatment. Functional validation showed that under salt stress conditions, AhZHD9-overexpressing Arabidopsis lines exhibited significantly lower MDA content but higher chlorophyll content, as well as significantly higher SOD, CAT, and POD activities compared to wild-type plants. Moreover, AhZHD9-overexpressing lines displayed less severe growth inhibition than wild-type plants, indicating that AhZHD9 overexpression can enhance antioxidant capacity and mitigate oxidative damage induced by salt stress. Conclusion AhZHD9 is a ZHD transcription factor involved in salt stress response, and its overexpression can enhance plant antioxidant defense capacity and improve salt tolerance.

    Identification of HXKs in Yam and Validation of Proteins Interacting with DoHXK3
    YUAN Shu-qi, ZHANG Yan-fang, NIE Yu-shan, LI Na, SUO Ning-ning, TAN Gui-lian, HUO Xiu-wen
    2026, 42(9):  306-315.  doi:10.13560/j.cnki.biotech.bull.1985.2025-1246
    Asbtract ( 94 )   HTML ( 5)   PDF (13958KB) ( 31 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective Hexokinase (HXK) catalyzes sucrose metabolism in plants, and the HXK gene is a key regulator of sucrose metabolism. Identification of DoHXK family members in yam, analysis of their expression patterns, and screening of interacting proteins aim to elucidate the core role of this family in sucrose metabolism, providing a basis for exploring the regulatory mechanism of starch synthesis promoted by sucrose metabolism and the metabolic response to abiotic stress in yam. Method The HXK gene family of yam was identified through an integrated analysis of transcriptomic and proteomic data from different developmental stages of yam. Physicochemical properties, phylogenetic relationships, hydrophilicity/hydrophobicity, and subcellular localization of the DoHXKs were then analyzed. The expression patterns of DoHXKs in different developmental stages, tissues, and under low-temperature, drought, and salt stress conditions were detected via RT-qPCR. Additionally, subcellular localization analysis of DoHXK3 was conducted, and its interacting proteins were screened. Result A total of four DoHXKs were identified, with an average of 602 amino acids, an average molecular weight of 58.45 kD, and an average isoelectric point of 6.56. They were most closely related to those of Dioscorea alata. The DoHXK family members showed obvious spatiotemporal expression specificity: at the tissue level, they were mostly highly expressed in tubers; at the developmental level, the expression level was most significant in the early stage of tuber expansion. DoHXKs could respond to three abiotic stresses (low temperature, drought, and salt), among which DoHXK2 and DoHXK3 were significantly induced by low temperature, DoHXK2-4 were strongly induced by salt stress, and the expression levels of DoHXK1 and DoHXK3 were significantly upregulated after drought stress. DoHXK3 might be a key factor in regulating the growth of yam and responding to abiotic stress. Subcellular localization results showed that DoHXK3 was located in the nucleus and cell membrane. Two interacting proteins of DoHXK3, DoA2C and DoERF3A, were screened and verified by the yeast two-hybrid system, which play important roles in plant resistance to abiotic stress and regulation of growth and development, respectively. Conclusion The four DoHXK family members in yam jointly participate in the response to low temperature, drought, and salt stress. Particularly, DoHXK3, as a key gene regulating growth and development and stress resistance, plays a dominant role in the early growth stage of yam and is strongly induced by low temperature and salt stress. Protein interaction studies indicated that DoHXK3 and its interacting proteins cooperatively regulate the development ofyamand play a core regulatory role in abiotic stress response.

    Identification of the AGPL Gene Family in Yam and Screening of DoAGPL1 Interacting Proteins
    NIE Yu-shan, ZHANG Yan-fang, YUAN Shu-qi, LI Na, SUO Ning-ning, TAN Gui-lian, HUO Xiu-wen
    2026, 42(9):  316-326.  doi:10.13560/j.cnki.biotech.bull.1985.2025-1247
    Asbtract ( 105 )   HTML ( 17)   PDF (56007KB) ( 50 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective This study aimed to identify and analyze the members of the DoAGPL gene family in yam (Dioscorea opposita), providing a foundation for elucidating the molecular mechanisms of starch synthesis and the stress-responsive metabolic network in yam. Method We characterized the DoAGPL family using bioinformatics to assess the physicochemical properties, phylogeny, and gene structures of its members. RT-qPCR was employed to evaluate their expression patterns in different developmental stages, tissues, and abiotic stress conditions. Additionally, we determined the subcellular localization of DoAGPL1 and demonstrated its interactions with DoAGPS and DoMADS through yeast two-hybrid (Y2H) and bimolecular fluorescence complementation (BiFC) assays. Result Six DoAGPL members were identified in yam, encoding proteins of 275–561 amino acids. Phylogenetic analysis classified them into four clades, and ten conserved motifs were identified. RT-qPCR analysis revealed that DoAGPL1 was highly expressed in tubers. Its expression was down-regulated during the early stage of tuber expansion and up-regulated during the peak expansion stage, suggesting that DoAGPL1 may serve as a core regulator of starch synthesis in tubers. Furthermore, DoAGPL1 responded to low-temperature and drought stresses, and the expression of DoAGPL members varied in different abiotic stress conditions. Subcellular localization analysis revealed that the DoAGPL1 protein was localized to the nucleus and the cell membrane. Yeast two-hybrid screening identified DoAGPS and DoMADS as DoAGPL1-interacting proteins, and the interactions were further confirmed. Conclusion Six DoAGPL members were identified from yam transcriptomic and proteomic data. DoAGPL1 was upregulated by cold and drought stresses and highly expressed in tubers, indicating a potential role in regulating stress responses and starch synthesis during tuber expansion.

    Effects of Combined Application of Trichoderma afroharzianum and Bacillus velezensis on Quinoa Basal Stem Rot and Rhizosphere Microecology
    ZHANG Wen-jing, MA Xin-rui, XU Zi-lu, LYU Hong, QIN Nan, YIN Hui, ZHAO Xiao-jun, REN Lu
    2026, 42(9):  327-341.  doi:10.13560/j.cnki.biotech.bull.1985.2025-1271
    Asbtract ( 156 )   HTML ( 15)   PDF (13365KB) ( 77 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective This study evaluated the control efficacy of a wettable powder formulation containing Trichoderma afroharzianum LMNS-M9 combined with another formulation containing Bacillus velezensis YPTJ-1 against quinoa basal stem rot and its regulatory effects on the rhizosphere microbial community structure. Method We conducted pot experiments to compare the control efficacy of the single and combined microbial agents, and we evaluated the efficacy of the combined agent at different concentrations in field experiments. We then used high-throughput sequencing to analyze the effects of the different treatments on the quinoa rhizosphere microbial communities. Result The control efficacy of the combined microbial agent against quinoa basal stem rot in the pot experiment was 73.55%, which was significantly higher than that of either single agent. In the field experiment, the best control efficacy (67.92%) was achieved when the combined microbial agent was diluted 300-fold. The efficacy of this combined treatment was comparable to that of the chemical pesticide fludioxonil in both pot and field conditions. The combination of the two agents significantly increased the number of OTUs and the alpha diversity indices of both bacterial and fungal communities in the soil. It also significantly increased the relative abundance of beneficial taxa, such as Actinomycetota and Chloroflexota, while reducing the abundance of pathogenic fungi. Furthermore, the combined treatment enhanced the stability and complexity of the microbial network structure in the quinoa rhizosphere. Functional prediction of the microbial communities revealed that the expression of bacterial functions related to amino acid transport and metabolism under the combined treatment was negatively correlated with the incidence of quinoa disease. Within the fungal community, the relative abundance of functional groups such as symbiotrophic and endophytic fungi increased significantly, whereas plant pathogenic groups decreased significantly. Conclusion The combined microbial agent can effectively inhibit the occurrence of quinoa basal stem rot by optimizing the rhizosphere microbial community structure, providing a theoretical basis and a new strategy for the green control of this disease.

    Synthesis of Antioxidant Protein Material by Escherichia coli and Its Applications in Promoting Wound Healing
    ZHAO Meng-die, XUE Wei-shi, WANG Jia-bang, LI Ling, YANG Ru-meng, WU Jun-jun
    2026, 42(9):  342-354.  doi:10.13560/j.cnki.biotech.bull.1985.2026-0087
    Asbtract ( 110 )   HTML ( 10)   PDF (5253KB) ( 64 )  
    Figures and Tables | References | Related Articles | Metrics

    Objective This study aimed to construct a self-assembling antioxidant protein material and to evaluate its effects on repairing oxidative cellular damage and promoting wound healing. Method We constructed recombinant plasmids by fusing a previously reported self-assembling elastin-like polypeptide scaffold with antioxidant amino acid sequences. We then transformed the constructs into Escherichia coli for fermentation and purification. We selected the protein with the optimal performance through free radical scavenging assays and further evaluated its application potential using cellular oxidative damage repair assays and rat wound healing experiments. Result The recombinant protein expressed and purified from E. coli self-assembled into a hydrogel at a concentration of 1%. After fusion with the antioxidant amino acid sequence, the free radical scavenging capacity of the protein was significantly enhanced. The scavenging rates of 80-2-MPH for 2,2-diphenyl-1-picrylhydrazyl (DPPH·), 2,2′-azino-bis (3-ethylbenzothiazoline-6-sulfonic acid) (ABTS+·), and hydroxyl radical (·OH) reached 41.1%, 66.8%, and 57.2%, respectively, which were significantly higher than those of the original protein 80-2-RGD (20.4%, 50.0%, and 21.8%, respectively; P<0.000 1). The 80-2-MPH protein exhibited good biocompatibility, with a relative cell activity of 117.6% at a concentration of 1 g/L. In the cellular oxidative damage repair experiment, the cell activity in the 80-2-MPH repair group was 49.6%, significantly higher than that of the control group (28.0%), as well as the glutathione (36.7%) and vitamin C (40.9%) treatment groups. The intracellular reactive oxygen species (ROS) content in the 80-2-MPH group showed no significant difference compared with the glutathione group. In the rat full-thickness wound healing experiment, the 80-2-MPH hydrogel group showed a wound closure rate of 93.6% on day 10, which was significantly higher than that of the control group (74.8%) and the commercial hydrogel dressing group (84.5%). Histological staining results showed that the 80-2-MPH hydrogel effectively promoted collagen deposition and dermal repair. Conclusion An antioxidant protein material, 80-2-MPH, capable of self-assembling into a hydrogel, was successfully expressed in E. coli. This protein reduced intracellular ROS levels in oxidatively stressed cells and promoted the repair of oxidative damage. The hydrogel dressing formed by the self-assembly of this protein effectively accelerates wound healing in rats.

    Content
    2026, 42(9):  355. 
    Asbtract ( 39 )   PDF (1252KB) ( 10 )  
    Related Articles | Metrics
    copyright
    2026, 42(9):  356. 
    Asbtract ( 42 )   PDF (155KB) ( 21 )  
    Related Articles | Metrics
    Cover
    2026, 42(9):  357. 
    Asbtract ( 62 )  
    Related Articles | Metrics