生物技术通报 ›› 2024, Vol. 40 ›› Issue (2): 223-232.doi: 10.13560/j.cnki.biotech.bull.1985.2023-0989

• 研究报告 • 上一篇    下一篇

白菜种子cDNA酵母文库的构建及BrTTG1互作蛋白的筛选及分析

任延靖1,2(), 张鲁刚3, 赵孟良1, 李江1,2, 邵登魁1,2()   

  1. 1.青海大学农林科学院 青藏高原种质资源研究与利用实验室,西宁 810016
    2.农业农村部青藏高原种质资源保护与遗传改良重点实验室,西宁 810016
    3.西北农林科技大学园艺学院,杨凌 712100
  • 收稿日期:2023-10-20 出版日期:2024-02-26 发布日期:2024-03-13
  • 通讯作者: 邵登魁,男,博士,研究员,硕士生导师,研究方向:蔬菜遗传育种;E-mail: 2006990015@qhu.edu.cn
  • 作者简介:任延靖,女,博士,副研究员,硕士生导师,研究方向:蔬菜遗传育种与分子生物学;E-mail: renyan0202@163.com
  • 基金资助:
    国家重点研发计划(2022YFD1602400);国家自然科学基金项目(31960602);青海省科技厅重点研发与转化项目(2022-NK-117)

cDNA Yeast Library Construction of Chinese Cabbage Seeds and Screening and Analysis of BrTTG1 Interacting Proteins

REN Yan-jing1,2(), ZHANG Lu-gang3, ZHAO Meng-liang1, LI Jiang1,2, SHAO Deng-kui1,2()   

  1. 1. Academy of Agriculture and Forestry Sciences, Qinghai University, Laboratory of Research and Utilization of Germplasm Resources in Qinghai-Tibet Plateau, Xining 810016
    2. Key Laboratory of Germplasm Resources Protection and Genetic Improvement of the Qinghai-Tibet Plateau in the Ministry of Agriculture and Rural Affairs, Xining 810016
    3. College of Horticulture, Northwest A & F University, Yangling 712100
  • Received:2023-10-20 Published:2024-02-26 Online:2024-03-13

摘要:

【目的】通过构建白菜种子的cDNA文库,筛选WDR 40蛋白TRANSPARENT TESTA GLABRA 1(TTG1)的互作蛋白,探究TTG1参与MBW三元复合体调控种皮原花青素形成的分子机制。【方法】以棕籽白菜自交系‘B147’的种子为材料,提取总RNA并建立cDNA文库,通过gateway技术构建诱饵载体pGBKT7-TTG1并进行酵母双杂交筛库。【结果】酵母文库库容为1.2×107 CFU,文库滴度是5.0×107 CFU/mL,插入片段平均长度大于1 000 bp,诱饵载体在酵母中无自激活活性。通过构建的诱饵载体pGBKT7-TTG1与构建的cDNA文库杂交,共获得了38个阳性互作蛋白,功能预测显示其中一个蛋白注释为MYB转录因子,注释为MYB73,序列分析结果显示该基因含有R2R3-MYB型抑制子保守基序C1和C2,推测该基因为白菜中参与种皮颜色形成的R2R3-MYB型抑制子,暗示着白菜中可能存在不同MYB转录因子参与的调控网络,影响着原花青素的形成。【结论】本研究构建了白菜种子组织的酵母双杂交cDNA文库,获得了38个TTG1阳性互作蛋白,首次挖掘到了可能影响白菜种皮颜色原花青素形成的R2R3-MYB型抑制子MYB73,为后期探究白菜种皮原花青素的调控网络奠定良好的基础。

关键词: 白菜种皮颜色, cDNA文库, 酵母双杂交, 互作蛋白, MYB73, 基因克隆, 表达分析

Abstract:

【Objective】 Screening the interacting protein of WDR40 protein TRANSPARENT TESTA GLABRA 1(TTG1)by constructing the cDNA library of Chinese cabbage seeds, the molecular mechanism of TTG1 in the regulation of the formation of MBW ternary complex will be explored.【Method】 Seeds of brown-seeded Chinese cabbage ‘B147’ were used as materials for RNA extraction and cDNA library construction. The bait vector pGBKT7-TTG1 was constructed by gateway technology and then yeast two-hybrid screening were performed.【Result】 The library capacity was 1.2×107 CFU and library titer was 5.0×107 CFU/mL with average length of the insert greater than 1 000 bp. The bait vector had no self-activating activity in yeast. A total of 38 positive interacting proteins were obtained by hybridizing the bait vector pGBKT7-TTG1 with the cDNA library. Function prediction revealed one of the proteins annotated as a MYB73 transcription factor. Sequence analysis results showed that this gene contained R2R3-MYB type suppressor conserved motifs C1 and C2, speculated that this gene may be the R2R3-MYB suppressor involving in the seed coat color formation in Chinese cabbage, suggesting that there may be different MYB transcription factors in the regulation network affecting the formation of proanthocyanidins.【Conclusion】 In this study, a yeast two-hybrid cDNA library of Chinese cabbage seed-specific tissue is constructed and a total of 38 TTG1-positive interacting proteins are obtained. We found the R2R3-MYB type suppressor MYB73 that may affect the formation of proanthocyanidin color in cabbage seed coat for the first time. This study lays a good foundation for exploring the regulatory network of proanthocyanindins formation.

Key words: Chinese cabbage seed coat color, cDNA library, yeast two-hybrid, interactive protein, MYB73, gene clone, expression analysis