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    26 September 2023, Volume 39 Issue 9
    Research Progress in Microbial Single Cell Separation Methods
    ZHANG Kun, YAN Chang, TIAN Xin-peng
    2023, 39(9):  1-11.  doi:10.13560/j.cnki.biotech.bull.1985.2022-1506
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    Most microorganisms in nature are in an uncultured state,which are called “microbial dark matter”. With the development of technology innovations in microbial single-cell separation, significant progress has been made in applying new technologies and methods to the challenges of microbial pure-culture. These new separation and culture strategies will greatly promote the development of microbial resources research. Despite the increasing achievements related to metagenomics and genomics, the isolation and cultivation of single microbial cells are still essential to systematically study their ecological functions, genetic evolution, and so on. This paper mainly summarizes the principle and application of membrane diffusion culture, microfluidic sorting, fluorescence activated cell sorting, single cell Raman sorting, optical tweezers technology, micromanipulation technology and other single cell separation technologies currently used or under development, as well as their advantages and disadvantages in microbial single cell isolation and culture. At the same time, the paper also discusses development and application prospects of single-cell separation technologies in the future.

    Application of Chemical Proteomics in Identifying the Molecular Targets of Natural Products
    ZHOU Lu-qi, CUI Ting-ru, HAO Nan, ZHAO Yu-wei, ZHAO Bin, LIU Ying-chao
    2023, 39(9):  12-26.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0188
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    The development and utilization of new green pesticides are conducive to the sustainable development of agriculture. Studying active leading discovery and action mechanisms based on natural products is essential for creating new pesticides. However, its target and action mechanism are difficult to determine, which hinders its development in new drug research and development. Therefore, discovering compound new targets is an important and arduous task for creating new pesticides. As a new technology in the post-genomic era, chemical proteomics has become one of the essential means of drug targeting. This paper reviewed the discovery methods and typical cases of molecular targets of chemical compounds based on proteomics and introduced main principles, applications, advantages and limitations of these technologies, aiming to provide references for the research of natural product targets and new pesticide creation by explaining the progress of the latest methods of discovering drug action targets based on chemical proteomics.

    Research Progress in Second-generation Fuel Ethanol Technology Based on Poplar(Populus sp.
    XU Fa-di, XU Kang, SUN Dong-ming, LI Meng-lei, ZHAO Jian-zhi, BAO Xiao-ming
    2023, 39(9):  27-39.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0121
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    As a cheap and abundant renewable raw material, lignocellulosic biomass can be converted into cellulosic fuel ethanol through pretreatment, enzymatic hydrolysis and microbial fermentation, etc., which has widely attracted attention in recent decades. Poplar is a kind of fast-growing hardwood that is widely artificially cultivated and is mainly used in papermaking industry. Poplar is considered as an excellent lignocellulosic material for the production of cellulosic ethanol due to its high contents in cellulose and hemicellulose components. The application of poplar in cellulosic ethanol production was focused on in this paper, including briefly introducing the composition and structural characteristics of poplar, and importantly overviewing the research progress of poplar in pretreatment technology, enzymatic hydrolysis of pretreatment raw materials and microbial fermentation and so on. Finally, the technical obstacles and difficulties restricting the application of poplar in cellulosic ethanol industry were summarized, and the corresponding countermeasures were analyzed and the application were prospected.

    Establishment of CRISPR/CasX-based Genome Editing Technology in Rice
    LI Xue-qi, ZHANG Su-jie, YU Man, HUANG Jin-guang, ZHOU Huan-bin
    2023, 39(9):  40-48.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0413
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    As a nuclease, the Cas protein needs to recognize a specific protospacer adjacent motifs(PAM)sequence to exert its cleavage activity, for example SpCas9 recognizes the NGG PAM and LbCas12a recognizes the TTTV PAM. CasX protein, a new protein that can recognize the TTCN PAM sequence was discovered,which expands the editing range of genome editing technology. Using PlmCasX and DpbCasX derived from CasX, CRISPR/CasX-mediated rice gene editing system was established. The editing efficiency through transient expression of rice protoplasts mediated with PEG was analysed, and the results showed that the endogenous OsCPK16 was effectively edited by PlmCasX and DpbCasX. The subsequent rice stable genetic transformation results indicated DpbCasX showed 17.5% editing efficiency in OsCPK21 at TTCA PAM sites, while PlmCasX showed higher editing efficiency in OsCPK21 at TTCA PAM sites and in OsCPK4 at TTCG PAM sites, with editing efficiency of 66.07% and 23.21%, respectively. And the optimization of PlmCasX protein based on the MIDAS method could not improve its editing activity. The study proved that the CRISPR/CasX system has editing activity in rice, and it can recognize the characteristic of TTCR PAM, expanding the application range of gene editing technology in rice.

    PAM Extension of Cytosine Base Editing Tool in Corynebacterium glutamicum
    LIU Jia-hui, LIU Ye, HUA Er-bing, WANG Meng
    2023, 39(9):  49-57.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0106
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    Base editing is a new genome editing technology, and has the advantages of not producing double strand break, not relying on homologous recombination and not adding foreign template. It has been widely developed and applied in eukaryotes and prokaryotes. In order to further expand the genome coverage of base editing technology in Corynebacterium glutamicum, three novel Cas9 mutants or different Cas9 proteins with relaxed PAM restriction were applied to cytosine base editing tools, namely, SpRY mutant(NRN> NYN PAM), SpG mutant(NGN PAM)and ScCas9++ protein(NNG PAM), the PAM extension for base gene editing tool is achieved. The base editing system combined with SpRY mutant showed more relaxed PAM recognition. Except for CAT, CAC and TAA PAMs, other NRN PAMs were recognized to varying degrees, but the overall editing efficiency was low, which was difficult for widely application. The base editing system combined with SpG mutant edited genome loci with all NGN PAMs, and the editing efficiency was better than that of SpRY mutant, but the editing efficiency of NGG PAM sites reduced by 9.3%-55.9% compared with that of original Cas9 protein. In combination with the base editing system of ScCas9++ protein, except for the genome loci of TCG and CTG PAM, the genome loci of other tested NNG PAM can be edited, and the genome editing efficiency of most loci was high, and the highest editing efficiency reached 100%. This study not only helps base editing tools to cover more genomic sites in Corynebacterium glutamicum, but also provides a favorable reference for PAM expansion of other genome editing tools based on CRISPR/Cas system.

    Process Optimization of Multi-strain Fermented Oat Bran and Hair Efficacy Evaluation
    ZHANG Yue-yi, LAN She-yi, PEI Hai-run, FENG Di
    2023, 39(9):  58-70.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0163
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    The fermentation conditions for co-extraction of β-glucan and polypeptide from oat bran by mixed bacteria and yeast culture were optimized using single factor and orthogonal test. The fermentation broth was analyzed for antioxidant and bacteriostatic performance, as well as application in hair protection. The optimal strain mixture for fermentation contained Bacillus subtilis, Bacillus licheniformis and Saccharomyces cerevisiae at an inoculation ratio of 7∶3∶5 by detecting of the viable number of B. subtilis and B. licheniformis during fermentation. The optimized fermentation conditions, resulting in β-glucan yield at 5.98% and oat polypeptide yield at 16.21%, were found to be the ratio of solid to liquid at 1∶7.5, temperature at 30℃, inoculation volume at 2% and fermentation time for 42 h and the main and secondary order of the effects of various factors on the fermentation yield of oat bran is material liquid ratio > inoculation amount > fermentation time > fermentation temperature. The fermentation broth reduced the radical formation as the radical scavenging rate of DPPH, ABTS and hydroxyl radical was 89.00%, 99.50% and 93.01%, respectively, with IC50 of 89.35, 1.315 and 91.26 mg/mL, respectively. The antibacterial activity of the fermentation broth against Escherichia coli, Staphylostreptococcus aureus and Malassezia furfur was analyzed and the minimum inhibitory concentration was 12.5, 25 and 12.5 mg/mL, respectively. The fermentation broth had significant effect on increasing hair glossiness, repairing hair scales, reducing dry hair combing force and improving reducibility of α-keratin. Based on the detection of the target active substance content and the evaluation of its efficacy in three extraction processes, the experimental results showed that the fermentation extraction process improved the comprehensive extraction efficiency of β-glucan and peptides compared to the heating extraction method and enzymatic extraction method, and had higher activity in antioxidant, antibacterial, repairing hair scales, and reducing keratin functions.

    Phosphate-solubilizing Properties and Optimization of Cultivation Conditions of Penicillium rubens: A Highly Efficient Phosphate Solubilizer
    ZHAO Guang-xu, YANG He-tong, SHAO Xiao-bo, CUI Zhi-hao, LIU Hong-guang, ZHANG Jie
    2023, 39(9):  71-83.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0268
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    In order to reduce the use of chemical fertilizers in agricultural production, a fungal strain JL-1 with high efficiency in degrading tricalcium phosphate was isolated from phosphorus-rich tea(Camellia sinensis L.)rhizosphere soil by using inorganic phosphorus screening medium, and identified as Penicillium rubens. The changes of pH value, phosphorus content and organic acid content of fermentation broth of strain JL-1 in the process of phosphorus solubilization showed that there was a significant negative correlation between pH value and gluconic acid content, a significant negative correlation between pH value and phosphorus content, and a significant positive correlation between gluconic acid and phosphorus content in the fermentation broth of strain JL-1. And the surface erosion marks of tricalcium phosphate particles were observed under the electron microscope. Further analysis uncovered that strain JL-1 eroded tricalcium phosphate and dissolved phosphorus by secreting gluconic acid. The culture conditions were optimized through a series of experiments including single factor experiment, Plackett-Burman design experiemnt, steepest climb experiment and central combination experiment. The results showed that glucose and ammonium sulfate were the optimal carbon and nitrogen sources for dissovling tricalcium phosphate by strain JL-1. Glucose content, tricalcium phosphate content and temperature were significant factors affecting the phosphorus solubility of strain JL-1. Under the conditions of 29.8 g/L glucose, 7.1 g/L tricalcium phosphate and 31.9℃, the phosphorus solubility of strain JL-1 in inorganic phosphorus medium, the solubilized phosphorus of the strain reached 1194.15 mg/L, which was nearly three times of the initial value. In phosphorus-deficient soil, this strain significantly promoted the growth of T. aestivum L., with its root length, plant height and total fresh weight increased by 57.9%, 36.4% and 42.9% respectively, indicating that the strain JL-1 had good functions of phosphate-dissolving and growth promotion. With the excellent phosphorus-dissolving characteristics and phosphate-dissolving ability, the strain JL-1 will provide a reference for the development and application in the field of biological fertilizer.

    Synthetic Pathway Construction of Producing 2'-fucosyllactose by Lactococcus lactis and Optimization of Fermentation Medium
    CHENG Ya-nan, ZHANG Wen-cong, ZHOU Yuan, SUN Xue, LI Yu, LI Qing-gang
    2023, 39(9):  84-96.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0149
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    2'-fucosyllactose(2'-FL)is the most abundant human milk oligosaccharide. Microbial fermentation is an important method to produce 2'-FL. Lactococcus lactisL. lactis), a food safety grade strain, can be directly used in dairy products, has not been reported for the production of human milk oligosaccharides. First, the 2'-FL salvage synthesis pathway was constructed by using a recombinant plasmid pNZ8148-2f containing gene fkp, futC, lacF in two usual L. lactis chassis NZ3900 and NZ9000. In the fermentation medium with 10 g/L fucose and 5 g/L lactose, the yields of 2'-FL in flasks were 0.16 g/L and 0.4 g/L, respectively. Combined with the growth assay, NZ9000 was considered as a better chassis. Second, 2'-FL de novo synthesis pathway was constructed in NZ9000, i.e., using homologous recombination technology and the unique knockout integration vector pNZ5319 in L. lactis,integrating the gene manA, manB, gmd and wcaG to the chromosome while knocking out unnecessary gene upp, and introducing the gene manC, futC and lacF to the cell by vector pNZ8148-1. Meanwhile, different promoter P32 and Pnis were used to optimize the expressions of the pathway enzymes. The best strain NZ9000 6 was obtained with a 2'-FL production of 0.28 g/L in flask fermentation medium with 20 g/L glucose and 5 g/L lactose. Finally, the concentrations of hemin, tryptone and yeast extract were optimized in the fermentation medium. With the addition of 2.5 μg/mL methemoferin chloride, 15 g/L tryptone, and 6 g/L yeast extract in the fermentation medium, the final 2'-FL production reached 1.58 g/L which was relatively high among the reported results. Thus, the feasibility of 2'-FL synthesis by L. lactis was proved, which provides a new idea for the production of 2'-FL.

    Preparation of Immobilized Lipase for the Solvent-free Synthesis of Cinnamyl Acetate
    CHEN Jin-hang, ZHANG Yi, ZHANG Jun-tao, WEI Ben-mei, WANG Hong-xun, ZHENG Ming-ming
    2023, 39(9):  97-104.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0028
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    Hydrophobically ordered mesoporous SiO2(OMS)carrier was prepared by template method combined with octyl surface modification, and immobilized lipase was prepared on this basis(CSL@OMS-C8), which was successfully applied to the solvent-free enzymatic preparation of cinnamyl acetate. Scanning electron microscope(SEM), transmission electron microscopy(TEM), nitrogen gas adsorption analyzer, Fourier transform infrared(FTIR)and contact angle goniometer were employed to characterize the carriers and immobilized enzyme. The results showed that OMS has ordered mesoporous morphology with a specific surface area of 149.9 m2/g and corresponding average pore diameter of 15 nm. The hydrophobicity of the material was greatly improved after hydrophobic modification with the contact angle increased from 20° to 120°. The optimal reaction conditions were obtained by optimizing the reaction conditions of enzymatic transesterification: reaction temperature was 50℃, molar ratio of cinnamyl alcohol to vinyl acetate was 1∶5, catalyst addition was 2 g/L, reaction time was 2 h, and the conversion rate reached 96.6%. Besides, the CSL@OMS-C8 maintained 80% conversion for cinnamyl alcohol after five-cycle reuse.

    Molecular Mechanism of Transcriptional Factor AtbHLH68 in Regulating Cell Wall Development by Transcriptome Analysis
    LIN Hong-yan, GUO Xiao-rui, LIU Di, LI Hui, LU Hai
    2023, 39(9):  105-116.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0091
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    Cell wall is a plant-specific structure and plays important role in morphogenesis, water and nutrients transportation, and biotic and abiotic resistance. Previous studies have shown that AtbHLH68 as a member of the 10th bHLH protein subfamily, is expressed in the vascular tissue of Arabidopsis thaliana stem. To investigate its molecular mechanism of AtbHLH68 in cell wall development, the estradiol-induced pER8-AtbHLH68 expression system was established in Arabidopsis thaliana. Quantitative real-time PCR(RT-qPCR)results showed that 10 μmol/L estradiol treatment for 4 h can effectively induce the expression of AtbHLH68, and the expression of AtbHLH68 gradually increased with the prolongation of induction time, reaching 29 times after 8 h. The differentially expressed genes(DEGs)induced by AtbHLH68 in Arabidopsis stems were detected by transcriptome analysis. Compared with the control group, after 8 h of treatment with 10 μmol/L estradiol, a total of 2 334 DEGs were detected, among which 831 genes were significantly up-regulated and 1 503 genes were significantly down-regulated. The significantly enrichment GO terms were mainly related to cell wall components, defense response, pectin modification and degradation and hormone response. KEGG analysis showed that DEGs involved in the processes such as pectin modification and lignin biosynthetic metabolism. These results indicated that the DEGs involved in the above processes may be regulated by AtbHLH68 directly or indirectly. This study provided theoretical evidences to clarify the molecular mechanism of transcription factor AtbHLH68 in cell wall development.

    Screening of OsCRK5-interacted Proteins in Rice Using Yeast Two-hybrid System
    WANG Zi-ying, LONG Chen-jie, FAN Zhao-yu, ZHANG Lei
    2023, 39(9):  117-125.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0090
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    Rice(Oryza sativa L.)is an important food crop, research on the regulation mechanism of rice growth and development can lay a theoretical foundation for the improvement of rice varieties. Calcium dependent protein kinases(CDPKs)are important protein kinases in plants which participate in plant growth and development, as well as in response to environmental reactions. CRK5(CDPK related kinase 5)in rice is highly homologous to CDPK in protein sequence and structure. Yeast two-hybrid screening library technology was used to screen OsCRK5 interacting proteins related to plant drought resistance in order to explore the molecular mechanism of OsCRK5 participating in drought response in rice plants. Firstly, the 1-1 332 bp fragment of OsCRK5 was cloned into the plastmid pGBKT7, and the bait vector pGBKT7-OsCRK5 was obtained. After verification by sequencing, the bait vector was transformed into the yeast strain Y2H Gold.It was observed that the recombinant protein didn't demonstrate the toxic effects and self-activation in selective nutrition medium, and the expression of the recombinant protein was analyzed by Western blot. Furthermore, the interacting proteins of OsCRK5 were screened from the rice cDNA library and 77 positive clones were obtained. The functional prediction showed that the interacting proteins were involved in protein synthesis, degradation and storage process, transcriptional regulation, cell growth and division process, energy metabolism and cell metabolic processes. Finally, OsWR1 and OsDi19-1 related to plant drought stress response were selected from positive clones. The interaction between OsCRK5 and OsWR1 and OsDi19-1 was verified by yeast two-hybrid and biomolecular fluorescence complementation experiments. The results lay a foundation for the genetic improvement of drought tolerance in rice.

    Construction of Yeast One-hybrid Library and Screening of Factors Regulating LAZY1 Expression in Rice
    HUANG Xiao-long, SUN Gui-lian, MA Dan-dan, YAN Hui-qing
    2023, 39(9):  126-135.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0001
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    LAZY1 regulates rice tiller angle by promoting the lateral auxin transport to grow erectly in rice, thereby increasing its production. To explore the molecular regulatory mechanism of LAZY1 expression, a yeast one-hybrid library screening system was used to screen the upstream regulated factors of LAZY1. Firstly, the genome DNA of Nipponbare and amplified the promoter sequences of LAZY1 were extracted. Then, this fragment was ligated into the pHIS2 bait vector and transformed into Saccharomyces cerevisiae AH109 to obtain pHIS2-LAZY1 bait yeast. Meanwhile, a cDNA library of 3 DAG seeding of Nipponbare was constructed by SMART technology. Then, the purified cDNA library was co-transformed into S. cerevisiae Y187 with pGADT7-Rec vector. The candidate transcription factors of LAZY1 were identified by mating bait yeast and library yeast. A total of 21 cDNA sequences were determined. Finally, the dual-luciferase transient assay showed that the transcription factor multiprotein-bridging factor(OsMBF1)activated the transcription of LAZY1 in vivo. In this study, more positive regulators of LAZY1 were identified, which will provide a theoretical basis for uncovering the network of auxin polar transport mediated by LAZY1 and tiller angle determination, and revealing the mystery of plant architecture from prostrate to erect.

    Construction and Utilization of Yeast Two-hybrid cDNA Library of Wheat Interacted by Puccinia triticina
    WEN Xiao-lei, LI Jian-yuan, LI Na, ZHANG Na, YANG Wen-xiang
    2023, 39(9):  136-146.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0251
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    In order to screen the target proteins interacting with effector proteins of the wheat leaf rust and to lay a foundation for dissecting the defense response mechanism of the effector proteins interfering with hosts and disease resistance breeding, the samples of interaction between the isolate13-5-28-1(JHKT)and susceptible wheat variety Thatcher at 0-12 d were collected. The three-frame homogenization was constructed by SMART method to screen the wheat cDNA library interacting with the wheat leaf rust. The homologous recombination method was used to construct the recombinant bait vector pGBKT7-Pt34084 of the effector factor Pt34084, and it was used as the bait protein to screen the interaction target protein by co-transformation method. The results showed that the cDNA library structure of the interaction between the wheat leaf rust and wheat was successfully constructed. The library capacity was about 1.05×107 CFU/mL, the titer was 1.2×109 CFU/mL, the average insertion fragment was more than 1 kb, and the recombination positive rate was 100%. The cDNA library met the requirement. The constructed bait recombinant vector pGBKT7-Pt34084 inhibited its self-activation after the addition of 20 mmol/L 3-AT and 400 ng/mL ABA to SD/-Trp-His-Ade medium. By this library a total of 16 different candidate interacting proteins from the wheat and the leaf rust were screened. These proteins were involved in plant metabolism, hormone signal transduction, plant disease resistance and other aspects. It indicated that Pt34084 could interfere with the host defense response and promote leaf rust infection through multiple pathways. The results are conducive to analyzing the pathogenic mechanism of wheat leaf rust and lay a foundation for creating new effective strategies to prevent and control wheat leaf rust.

    Cloning of StCIPK11 Gene and Analysis of Its Response to Drought Stress in Solanum tuberosum
    LIU Wen-jin, MA Rui, LIU Sheng-yan, YANG Jiang-wei, ZHANG Ning, SI Huai-jun
    2023, 39(9):  147-155.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0062
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    This study is to clarify the function and mechanism of StCIPK11 in potato(Solanum tuberosum)in the signal transduction in responses to drought stress, aiming to provide theoretical basis for deeply understanding the molecular mechanism responding to drought stress. Homologous recombination and artificial microRNA technology were used to construct the overexpression vector and the interference vector of potato StCIPK11, and they were transferred into the potato cultivar ‘Atlantic’ via Agrobacterium. According to the RT-qPCR data, StCIPK11 was expressed 11.59 and 21.76 times more in the overexpression plants than in the non-transgenic plants, and the the interference degree of StCIPK11 in the interference plants reached 78%. Under drought stress via PEG, the proline content and antioxidant enzymes(superoxide dismutase and peroxidase)activities of the overexpression plants were lower than those of the non-transgenic plants, and the malondialdehyde content in their leaves was significantly higher than that of the non-transgenic plants. The StCIPK11-interfering plants, however, presented the opposite trend. StCIPK11 was involved in the drought stress response process, and StCIPK11 interference expression could lessen the sensitivity of potato plants to water stress.

    Effects of Root Exudates in Resistant and Susceptible Varieties of Cotton on the Growths and Gene Expressions of Fusarium oxysporum
    LOU Hui, ZHU Jin-cheng, YANG Yang, ZHANG Wei
    2023, 39(9):  156-167.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0284
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    This work aims to investigate the effects of root secretions in resistant and disease-susceptible varieties of cotton on the growths and gene expressions of Fusarium oxysporum. The cotton susceptible variety Xinhai 14(XH-14)and the disease-resistant variety Xinhai 41(XH-41)were used as materials, and the cotton root secretion and Fusarium oxysporum(F327)was co-cultured to observe the growth of the bacteria; and the samples were taken at 0, 6, 12, 24 and 48 h of incubation and RNA-seq was performed. The results showed that the colonies treated with the XH-14 root exudates grew faster, their spore germination rate was higher, and the sporulation significantly increased, when compared with the colonies treated with XH-41 root secretion. GO(Gene Ontology)analysis revealed that the differentially expressed genes(DEGs)of colonies treated with XH-14 root secretion were mainly enriched in amino acid transport, fatty acid biosynthetic process, membrane components, and ion channel activity. The DEGs under XH-41 root secretion treatment were mainly enriched in transmembrane transport, tricarboxylic acid cycle, membrane components, and ATPase activity. KEGG(Kyoto Encyclopedia of Genes and Genomes)analysis uncovered that DEGs under XH-14 root secretion treatment were were mainly enriched in metabolic pathways such as TCA cycle, carotenoid biosynthesis, glutathione metabolism and riboflavin metabolism. The main DEGs under XH-41 root secretion treatment were enriched in metabolic pathways such as carbon metabolism, other glycan degradation, fatty acid metabolism and ABC transporters. The results of the comprehensive analysis showed that 24 genes related to cell wall degradation enzymes were obtained, among which the largest number of genes were enriched in “hydrolase activity, hydrolysis of O-glycosyl compounds” under 6 h of root secretion treatment in the susceptible cotton varieties. The results of this study provide a basis for screening potential key pathogenic genes of cotton wilt fungus and provide a theoretical basis for the prevention and control of cotton wilt.

    Effect of RD29A Promoter on the Stress Resistance of Transgenic Tobacco with SikCDPK1 Gene from Saussurea involucrata
    LIU Yu-ling, WANG Meng-yao, SUN Qi, MA Li-hua, ZHU Xin-xia
    2023, 39(9):  168-175.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0150
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    This work is to explore the effect of the stress-induced promoter RD29A on the stress tolerance of transgenic tobacco with SikCDPK1 gene from Saussurea involucrata, thus which may lay the foundation for SikCDPK1 gene to play a more effective role when the plant encounters low temperature and drought. Gene recombination technology was used to construct the plant expression vector of SikCDPK1 gene driven by RD29A promoter, and genetic transformation into tobacco by agrobacterium-mediated method, and the phenotype, chlorophyll content, MDA content, POD activity, SOD activity and relative conductivity of RD29A∷SikCDPK1 transgenic tobacco and 35S∷SikCDPK1 transgenic tobacco and non-GMO tobacco were observed, measured and compared after low temperature and drought treatment. As results, the growth status of RD29A∷SikCDPK1 transgenic tobacco was better than that of 35S∷SikCDPK1 transgenic tobacco, and better than that of non-GMO tobacco after drought and low temperature stress. At the same time, the chlorophyll content, POD activity and SOD activity of RD29A∷SikCDPK1 transgenic tobacco were significantly higher than those of 35S∷SikCDPK1 transgenic tobacco, which was very significantly higher than that of non-GMO tobacco. However, the relative conductivity and MDA content of RD29A∷SikCDPK1 transgenic tobacco were significantly lower than 35S∷SikCDPK1 transgenic tobacco, which was very significantly lower than that of non-GMO tobacco. In sum, the promoter RD29A could show stronger drought and low temperature tolerance by slowing down the degradation rate of chlorophyll, increasing enzyme activity of antioxidant system and reducing membrane permeability.

    Gene Mapping of Kale White Leaves Based on Whole Genome Re-sequencing of Extreme Mixed Pool(BSA)
    WANG Teng-hui, GE Wen-dong, LUO Ya-fang, FAN Zhen-yu, WANG Yu-shu
    2023, 39(9):  176-182.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0275
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    This study is aimed to screen for key genes and loci associated with white leaf formation in kale(Brassica oleracea L. var. acephala DC)and the genetic patterns of heart leaf color traits. The kale red-leaf parent WR, the white-leaf parent WB and their constructed F2 segregating populations were used as test materials. Twenty red-leaf and white-leaf plants were selected from the F2 population, and two DNA mixing pools were constructed. Whole genome sequencing to offspring mixing pool and parents at 50x and 20x cover depth was conducted respectively, and the association interval of white leaf traits was located and candidate genes were predicted according to the gene annotation information. The results showed that re-sequencing 3 987 718 single nucleic acid polymorphism(SNP)markers were obtained via re-sequencing, 8 significant association intervals on chromosomes 2,3, and 9 were obtained, and 8 candidate genes(Bol030253, Bol029431, Bol012077, Bol007709, Bol030318, Bol030235, Bol030286, and Bol005195)were obtained based on gene annotation and functional analysis. Identifying eight genes as candidate genes for white kale leaves may play an important role in the color formation of kale leaves.

    The Gene JrSnRK1α1.1 of Walnut Regulates Seed Oil Synthesis and Accumulation
    WANG Gui-fang, YAO Yuan-tao, XU Hai-feng, XIANG Kun, LIANG Jia-hui, ZHANG Shu-hui, WANG Wen-ru, ZHANG Ming-juan, ZHANG Mei-yong, CHEN Xin
    2023, 39(9):  183-191.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0043
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    In order to investigate the regulation mechanism of SnRK1 protein kinase on seed oil synthesis and accumulation in walnut, the gene JrSnRK1α1.1, coding the α subunit of SnRK1 protein kinase, was cloned and isolated from cDNA of ‘Xiangling’ walnut kernel. The total length of its CDS sequence was 1 539 bp, encoding 512 amino acids. The overexpression recombinant vector PBI121-JrSnRK1α1.1 was constructed, transformed, and the transgenic Arabidopsis strains J-1, J-2, and J-3 were obtained. There was no significant difference between transgenic plants and wild-type during the process of plant growth and development. Some transgenic seeds were shrunk compared with the wild-type observed by digital microscope. The percentage of the shrunken seeds of J-1, J-2 and J-3 were 43.69%, 60.80% and 45.87% respectively, which were significantly higher than that of WT(8.43%). The weight of 1 000 seeds decreased by 27.95% to 29.32% compared with the wild-type, with a significant difference. The average length and width of seeds also decreased significantly. Therefore, the gene JrSnRK1α1.1 may be involved in the development of Arabidopsis seeds. The crude fat content of transgenic Arabidopsis seeds decreased 9.66%, 23.86% and 17.61% respectively compared with WT. Fluorescence bimolecular assay showed that JrSnRK1α1.1 interacted with JrWRI1 of key transcription factor in oil synthesis. To sum up, over-expressing the walnut JrSnRK1α1.1 gene has no obvious effects on transgenic Arabidopsis plant growth and development, but significantly affects the development of seeds, and negatively regulates the synthesis and the accumulation of seed oil.

    In Situ Screening of Carotenoid Degrading Strains and the Application in Improving Quality and Aroma of Cigar
    WU Qiao-yin, SHI You-zhi, LI Lin-lin, PENG Zheng, TAN Zai-yu, LIU Li-ping, ZHANG Juan, PAN Yong
    2023, 39(9):  192-201.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0258
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    Endophyte degrading carotenoids were screened and applied to domestic cigar leaves to increase domestic cigar tobacco leaves(CTLs)aroma and improve sensory quality. CTLs powder was added into in situ medium to simulate the growth environment of tobacco endophytes, and enrichment culture combined with flow cytometry technology was used to screen strains with β-carotene-degrading ability from high-quality cigar tobacco endophytes. The strains inoculated into domestic CTLs, and the contents of carotenoid degradation products were detected and the sensory quality of CTLs was analyzed. Total 21 endophytes had β-carotene degradation rate over 50%, mainly including Agrobacterium, Rhizobium, Sphingobacterium, Enterobacter, etc. These strains made different effects on CTLs sensory quality, among which strains C31, C11 and H4 increased the aroma type, significantly improved the aroma quality, aroma amount, miscellaneous gas, irritation and other CTLs sensory index. The carotenoid-degrading product content from strain C31, C11 and H4 CTLs was 1.38, 1.28 and 1.43 times compared with CK, respectively. The farnesyl acetone, geranyl acetone and megastigmatrienone strengthened the burnt sweet, flowery and woody aroma of CTLs. The three endophytes C31, C11 and H4 obtained by in situ screening can better improve the domestic CTLs sensory quality, and can be further developed and applied as microbial preparations of new cigar industry and characteristic aromatic cigar.

    Responses of Rubisco and Rubisco Activase in Different Resistant Tobacco Strains to Brown Spot Stress
    YANG Zhi-xiao, HOU Qian, LIU Guo-quan, LU Zhi-gang, CAO Yi, GOU Jian-yu, WANG Yi, LIN Ying-chao
    2023, 39(9):  202-212.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0278
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    Using resistant and susceptible tobacco strains JYH and CBH as test materials, the effects of brown spot stress on the photosynthesis and activities of ribulose-1,5-bisphosphate carboxylase/oxygenase(Rubisco)and ribulose-1,5-diphosphate carboxylase/oxygenase activase(RCA)and their gene expressions were analyzed. The results showed that, there were obvious inhibition effects on a series of photosynthetic parameters and the activities, expression levels and protein contents of Rubisco and RCA in JYH at 9 d of brown spot stress. Meanwhile, tobacco brown spot stress notably reduced the photosynthesis and activities of Rubisco and RCA in CBH, in addition, the relative expression of Rubisco large and small subunits genes(rbcL and rbcS)and RCA genes(rca)and their protein contents all decreased under stress condition. In comparison with CBH, the activities, expression levels and protein contents of Rubisco and RCA in JYH were all significantly higher at the stress treatment of tobacco brown spot. The correlation analysis results also indicated that Pn had significant and extremely significant positive correlation with the activities, gene expression of Rubisco and RCA, respectively. These results suggest that the resistant strain JYH can maintain higher values of Pn, Rubisco and RCA activities under tobacco brown spot stress, which account for the resistance to brown spot stress.

    Control of Pepper Fusarium Wilt by Bacillus subtilis Ya-1 and Its Effect on Rhizosphere Fungal Microbial Community
    ZHAO Zhi-xiang, WANG Dian-dong, ZHOU Ya-lin, WANG Pei, YAN Wan-rong, YAN Bei, LUO Lu-yun, ZHANG Zhuo
    2023, 39(9):  213-224.  doi:10.13560/j.cnki.biotech.bull.1985.2022-1457
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    This work aims to investigate the control effects of the biocontrol bacterium Bacillus subtilis Ya-1 on pepper Fusarium wilt and its effect on rhizosphere soil fungal community and diversity after pepper is infected by Fusarium oxysporum. B. subtilis Ya-1 was used as inoculum to investigate its control effect on pepper Fusarium wilt, and high-throughput sequencing was used to study the changes of rhizosphere soil fungal community by F. oxysporum infection between before inoculation and at 10 d and 20 d after inoculation. Compared with FOC treatment(C), the control effects of Ya-1+FOC(D)at day 10 and day 20 were 77.93% and 77.26%, respectively. The fungal α diversity of B. subtilis Ya-1 and F. oxysporum capsicum groups was higher than that of F. oxysporum group at day 10 and day 20. The composition of fungal community changed significantly after treatment. At the same time, the fungal community of the treatment group and the control group were significantly different, and the fungal community of the FOC and Ya-1+FOC treatment were also significantly different(P< 0.05). The dominant fungal populations in all treatments were Ascomycota, Zygomycota and Basidiomycota. At day 10 and day 20, the relative abundance of inoculated pathogens(OTU_1)was significantly different between FOC and Ya-1+FOC treatment. The total relative abundance of Mortierella increased and OTU_1 decreased at day 10 and day 20, respectively. Compared with the control group, the number of nodes decreased after inoculation with Fusarium wilt, while the number of positive junctions decreased after treated with B. subtilis Ya-1. B. subtilis Ya-1 treatment had a promising control effect on pepper Fusarium wilt, while it also changed the diversity and structure of rhizosphere fungal community and reduced the complexity of fungal community and abundance of pathogenic bacteria in rhizosphere soil.

    Analysis of Metabolic Differences of Biocontrol Strain DZY6715 at Different Growth Stages
    ZHOU Ai-ting, PENG Rui-qi, WANG Fang, WU Jian-rong, MA Huan-cheng
    2023, 39(9):  225-235.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0148
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    Bacillus tequilensis DZY6715 is a biocontrol strain that has a good inhibitory effect on Colletotrichum fructicola in Camellia oleifera. In order to clarify the different metabolic substances and their regulatory functions of the strain at the early and late stages of growth, based on the growth curve of strain DZY6715, plate confrontation method was used to determine the inhibitory activity of the strain against C. fructicola in the early and late stages of growth, and then non-targeted metabolomic technology was employed to perform bioinformatics analysis of the fermentation broth in these two stages. The results showed that antifungal activity of strain DZY6715 in the early growth stage was significantly weaker than that in the late growth stage. In the sample DZYB72h_vs_DZYB24h, 32 pathways were annotated, and 183 differential metabolites were enriched in the top 20 pathways. Among them, there were 5 pathways with high potential importance, and 84 differential metabolites of 27 kinds were enriched. The involved differential metabolites were mainly amino acids and organic acids, accompanied by norfloxacin, N-acetyl-d-glucosamine, adenosine, phenol, etc. Furthermore, the total expression of amino acids in the early growth stage was significantly higher than that in the late growth stage, while the total expressions of organic acids and other differential metabolites in the late growth stage were significantly higher than that in the early growth stage. Therefore, this study confirmed that amino acids are mainly involved in the construction of cell structure and have antibacterial function, while organic acids, norfloxacin, adenosine and other substances are more important regulators in the process of resistance to stress.

    Construction of cDNA Library of Cinnamomun bodinieri Induced by Saline-alkali Stress and Screening of CbP5CS Upstream Regulators
    HAN Hao-zhang, ZHANG Li-hua, LI Su-hua, ZHAO Rong, WANG Fang, WANG Xiao-li
    2023, 39(9):  236-245.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0022
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    The saline-alkali soil is a major factor limiting the introduction and popularization of Cinnamomun bodinieri. Proline is one of the most important compatible solutes that plants accumulate for osmotic adjustment in response to saline-alkali stress. Therefore, it is of great significance to identify the key transcription factors that regulate the biosynthesis of proline and illustrate the underlying molecular mechanisms. In the present study, the seedlings were treated with 0 and 10 mmol/L Na2CO3 solution on the basis of hydroponic culture, respectively. Total RNA was extracted from the root tissues at 6 and 48 h after treatment to construct the yeast cDNA library induced by saline-alkali stress. The promoter sequence of CbP5CS was cloned using total DNA of C. bodinieri root system as template. The titer of the library was 4.88×107CFU/mL, and the total clone number was 9.76×107 CFU. The average size of the inserts was 1 000 bp, and the recombination efficiency was 100%, which met the requirements of yeast hybridization test. The length of the cloned promoter of CbP5CS was 2 012 bp, and the decoy plasmid pHIS2-CbP5CS was constructed successfully. Then the promoter region of CbP5CS was cloned and the CbP5CS promoter interacting proteins was screened by yeast one hybrid and high-throughput sequencing. The 31 unique CbP5CS-interatcting ESTs were identified from the library by co-transformation, 32 EST sequences were interacted with CbP5CS verified via yeast rotation. Six of them were annotated as transcription factors, including GW020491(zinc finger CCCH domain-containing protein 25 isoform X1), GW028183(AtbHLH104), GW000650(transcription factor TFIIIC), GW007525(RING/FYVE/PHD zinc finger superfamily protein), GW015686(GATA type zinc finger transcription factor family protein), GW027120(AtbHLH96). These results provide a basis for further study on the molecular mechanism of plant proline metabolism in response to saline-alkali stress.

    Isolation, Identification and Degradation Characteristics of Functional Bacteria for NH3 and H2S Degradation
    JIANG Hai-rong, CUI Ruo-qi, WANG Yue BAI, Miao ZHANG, Ming-lu , REN Lian-hai
    2023, 39(9):  246-254.  doi:10.13560/j.cnki.biotech.bull.1985.2022-1202
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    In order to reduce the emission of malodorous gas during the stacking of kitchen waste, two strains CN5 and CS2 with high degradation of NH3 and H2S were isolated and screened from kitchen waste by enrichment and domestication, qualitative primary screening and quantitative secondary screening methods. They were identified as Enterococcus sp. and Pseudomonas sp. by 16S rDNA sequence analysis. The optimal deodorizing conditions of microbial deodorant were determined by single factor experiment: culture temperature was 35℃, pH was 7, carbon nitrogen ratio was 25∶1, carbon source was sucrose, nitrogen source was ammonium chloride, and the degradation rate of NH3 and H2S could be maintained at about 85%. Strains CN5 and CS2 grew best in the mixed state of 2∶3, and the maximum value of OD600 was 1.342. The determination of ammonia nitrogen content and sulfate content, it was found that the final ammonia nitrogen content was 50.5 mg/L, and the degradation rate of bacteria to ammonia nitrogen was 85.3%. The sulfate content was 302.7 mg/L, and the sulfate production rate of bacterial agent was 89.2%. The results showed that the two strains screened from the kitchen waste had good ability to degrading NH3 and H2S, and the two strains had synergistic effect with each other.

    Properties of Bacillus subtilis Strain BBs-27 Fermentation Broth and the Inhibition of Lipopeptides Against Fusarium culmorum
    MIAO Yong-mei, MIAO Cui-ping, YU Qing-cai
    2023, 39(9):  255-267.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0086
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    Bacillus subtilis strain BBs-27 isolated from the medicinal plant Bulbophyllum sp. shows strong antifungal activity against Fusarium culmorum. In order to further understand the composition of fermentation broth and its antifungal mechanism, the properties of fermentation broth were studied by acid-base treatment, ultraviolet irradiation and enzymolysis. On the above basis, the type of lipopeptides(LPs)in the fermentation broth was identified using LC-MS. The antifungal effects of LPs were analyzed from the morphology, physiology and transcriptome levels. The results showed that the antifungal activity of the fermentation broth was the strongest at pH=6, and decreased significantly at pH < 4 or > 10, and declined significantly when UV irradiation in over 10 min, easily hydrolyzed by other three proteases, but insensitive to pepsin. It was speculated that antifugal antifugal substances were mainly lipopeptides, and contained a small amount of protein. LPs LPs were mainly iturin and fengycin by LC-MS analysis. The fungus mycelium treated by LPs was twisted, informed and abnormally swollen under SEM. LPs had a significant impact on the activities of SOD, POD, CAT and the contents of soluble protein and soluble sugar, and all five physiological indicators were highly correlated with antifungal rate. With F. graminis genome as reference, Q20 and Q30 were above 96%, 91% respectively, GC content ranged from 52.27% to 52.87%, comparison rate was above 78%. Total 712 differentially expressed genes(DEGs)were screened, of which 393 were up-regulated and 319 were down-regulated. The Go functional annotation classification showed that 712 DEGs were mainly involved in 6 biological processes, 11 cell components and 12 molecular functions. KEGG enrichment analysis revealed that the DEGs were mainly enriched in the metabolisms of carbohydrate, lipid, amino acid, cofactors and vitamins. Genes including GAO, CHS3, MPG1, FGSG_02016, IPDH and ODC responding to LPs affected the fungus growth by interfering with the normal synthesis of cell wall, cell membrane, amino acids and antioxidant enzymes. These results provide a theoretical basis for further development and utilization of safe microbial pesticides.

    Construction of L-phenylalanine High-producing Corynebacterium glutamicum Engineered Strains via Multi-gene Simultaneous Regulation Combined with High-throughput Screening
    XUE Ning, WANG Jin, LI Shi-xin, LIU Ye, CHENG Hai-jiao, ZHANG Yue, MAO Yu-feng, WANG Meng
    2023, 39(9):  268-280.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0280
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    L-phenylalanine(L-Phe)is an important intermediate in the food and pharmaceutical industries. However, due to the complex regulation mechanisms and the long its biosynthetic pathway, it is difficult to achieve the flux balance between each module by relying only on plasmids or long-cycle iterations of genome editing, thus limiting its production. In this study, seven key genes(ppsA, tktA, aroFfbr, aroE, aroL, pheAfbr, and tyrB)carrying the constitutive promoter PF11 and a ribosome binding site(RBS)with the sequence GGGGGGGG in the L-Phe biosynthesis pathway were integrated into the genome of Corynebacterium glutamicum. Using the Base Editor-Targeted and Template-free Expression Regulation(BETTER)technology in our labbased on the CRISPR/Cas system and cytidine deaminase, the RBSs for each key gene were simultaneously edited to generate a RBS mutant library enriched with G/A. The library was subjected to high-throughput screening using a fluorescence protein-based L-Phe biosensor combined with a droplet microfluidics system. Finally, four mutant strains were selected from about 70 000 RBS mutants with varied degrees of L-Phe production improvement. The L-Phe titers in these strains at 72 h during shake-flask fermentation were 2.06, 1.30, 4.42, and 7.44 mmol/L, respectively, which were 2.43, 1.17, 6.37 and 11.40 times higher than the control strain C.g-2(0.6 mmol/L). The simultaneous regulation of multigene expression levels and screening of combinatorial libraries using base editing techniques may provide a feasible strategy for L-Phe engineering breeding.

    Improving the Activity of L-aspartate-a-decarboxylase from Corynebacterium jeikeium Through Semi-rational Design and Whole-cell Catalytic Synthesis of β-alanine
    LIU Hao, MA Shi-jie, ZHOU Zhe-min, CUI Wen-jing
    2023, 39(9):  281-290.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0085
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    β-alanine is an important block in the synthesis of many drugs, which can be obtained by catalyzing the decarboxylation of L-aspartic acid. At present, the low activity of PanD enzyme is the bottleneck of whole cell catalytic synthesis of β-alanine. Therefore, in this study, using enzyme mining, we obtained L-aspartic acid α-decarboxylase from Corynebacterium jeikeium, and successfully expressed it in Escherichia coli. We leveraged AlaphFold2 to model the structure of the enzyme and docked L-aspartate to it. The hotspot residues to be mutated was determined by Rosetta virtual mutation, The mutant L39A was finally screened out by using thin layer chromatography(TLC)and was purified for characterization. The enzymatic characterization data showed that the specific enzyme activity was 13.45 U/mg, which was 1.4-fold higher than that of wild type(9.6 U/mg). The optimal pH of both the wild-type enzyme and L39A mutant were 6.5. Moreover, the wild-type enzyme and the L39A mutant were both stable between pH 6.0 and 7.0. The optimal temperature of both the L39A mutant and the wild-type enzyme were 55℃, and the thermal stability of L39A was higher than that of the wild-type enzyme. Besides, the catalytic efficiency of the mutant was 1.4-fold higher than that of the wild-type enzyme. Structural analysis of the mutant revealed that the hydrophilicity was enhanced when the position 39 was replaced by alanine with smaller side chain group, and accordingly the interaction between the key catalytic amino acid tyrosine 58 and other surrounding residues was reinforced, which improved the stability of the region around the active center. Eventually, the catalytic activity of L39A mutant was augmented. The whole-cell catalytic results showed that L39A converted 70% L-aspartate after 4 h biotransformation, while the wild-type enzyme only converted approximately 50% substrate in the same time. Along with the process of transformation, L39A converted 90% substrate at 10 h, and eventually completely converted 1 mol/L substate at 12 h. The improvement of whole cell transformation efficiency was more obvious under the substrate condition of 1.5 mol/L. The mutant screened in this study has the potential for industrial application, and a green and efficient β-alanine biosynthesis method has been established, which lays an important foundation for the industrialization of β-alanine biosynthesis.

    Effect of Melatonin on Protecting the Jejunum Mucosal Epithelial Cells from Oxidative Stress Damage
    KANG Ling-yun, HAN Lu-lu, HAN De-ping, CHEN Jian-sheng, GAN Han-ling, XING Kai, MA You-ji, CUI Kai
    2023, 39(9):  291-299.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0190
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    The oxidative injury of intestinal mucosa is strongly associated with the development and intestinal diseases such as diarrhea for animals. Melatonin(N-acetyl-5-methoxy-tryptamine), as an indoleamine neurohormone, has important role in the processes of antioxidant protection. To investigate the protective effect of melatonin on the oxidative injury to the mucosal epithelial cells, the primary mouse jejunum mucosal epithelial cells were isolated and exposed to the FeSO4 and H2O2 to establish the oxidative damage model. After adding different doses of melatonin to the epithelial cells, we observed the cells’ pathological changes and then detected the changes of oxidative products, antioxidant enzymes, and inflammatory-related cytokines. It is found that after treatment with FeSO4 and H2O2, the mucosal epithelial cells programmed severe injury with significant increase of malonaldehyde and down-regulation of antioxidant enzymes. When adding melatonin to epithelial cells, the significantly-decreased malonaldehyde and highly-expressed antioxidant enzymes were detected. Meanwhile, melatonin also significantly reduced the expression of pro-inflammatory factor interleukin-6, and increased the expression of chemotactic factor interleukin-8. Therefore, melatonin may alleviate the oxidative damage of mucosal epithelial cells of jejunum caused by the increase of free radicals, and reduce the inflammatory response induced by oxidative damage.

    Analyses of Endocrine Regulation and Expression of Genes Related to the Molting Signaling Pathway in the Molting Cycle of Macrobrachium rosenbergii
    DING Li, DU Ting-ting, TANG Qiong-ying, GAO Quan-xin, YI Shao-kui, YANG Guo-liang
    2023, 39(9):  300-310.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0169
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    Molting is the important physiological process in Macrobrachium rosenbergii. This work is aimed to explore the endocrine regulation of M. rosenbergii and the expression patterns of related genes in the molting pathway, and to reveal the molecular regulatory pathways of M. rosenbergii molting. The activities of molt-related enzymes(glutamine synthetase, β-N acetylglucosaminidase and chitinase)and ecdyhormone contents in the molting cycle of hepatopancreas and hemolymph in M. rosenbergii were determined, and the expressions of Mr-ETHR, Mr-FTZ-F1, Mr-ECR, Mr-RXR, and Mr-MIH were detected by RT-qPCR. The results of enzymatic activity showed that glutamine synthetase was more active in hemolymphatic than in hepatopancreatic(P<0.05). β-N acetylglucosaminidase had much higher pre-molting activity in hepatopancreatic and hemolymphatic than in the postmolt stage(P<0.05). In the hepatopancreas, chitinase activity was the highest in the postmolt stage(P<0.05). The content of ecdytropin in the hepatopancreatic and hemolymphatic was the lowest in the intermolt stage and the highest in the postmolt stage. The ORF length of Mr-ETHR gene was 1 173 bp, encoding 390 amino acids, and the sequence was relatively conserved. The ORF length of Mr-FTZ-F1 gene was 1 206 bp, encoding 401 amino acids. The Mr-ETHR, Mr-RXR and Mr-ECR expressed the highest in the postmolt stage, while Mr-FTZ-F1 was the highest in the premolt stage. The expressions of Mr-MIH reached the highest in the intermolt stage and the lowest in the postmolt stage. Cluster and correlation analyses showed that Mr-ETHR and Mr-RXR and Mr-ECR expression patterns were closely related and had a very significant positive correlation(r=0.7030, P<0.01; r=0.8680, P<0.01), Mr-FTZ-F1 and Mr-MIH expression patterns were similar and positively correlated(r=0.6665, P<0.01), while Mr-FTZ-F1 was negatively correlated with Mr-ECR and Mr-ETHR(r=-0.8339, P<0.01; r=-0.6275, P<0.01). It was shown that the molting process of R. rosenbergii was regulated by glutamine synthetase, β-N-acetylaminoglucosidase and chitinase, and Mr-ETHR, Mr-RXR, Mr-ECR, Mr-FTZ-F1 and Mr-MIH were involved in regulating the molting process of M. rosenbergii, and Mr-ETHR, Mr-RXR and Mr-ECR were positively regulated in the molting signaling pathway, while Mr-FTZ-F1 and Mr-MIH were negatively regulated. Mr-ETHR, Mr-RXR and Mr-ECR play a positive regulatory role in the molt signaling pathway, while Mr-FTZ-F1 and Mr-MIH play a negative regulatory role. This study's results provided a foundation for the study of molting regulation mechanism in the downstream of the molting signaling pathway in crustaceans.

    Mechanism Investigation of Ferric Ammonium Citrate on Transfection for Suspended HEK293 Cells
    CHEN Zhong-yuan, WANG Yu-hong, DAI Wei-jun, ZHANG Yan-min, YE Qian, LIU Xu-ping, TAN Wen-Song, ZHAO Liang
    2023, 39(9):  311-318.  doi:10.13560/j.cnki.biotech.bull.1985.2023-0177
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    Suspended HEK293(human embryonic kidney)cell transfection based on PEI(polyethyleneimine)is a prospective technology. However, the components of the medium often affect the transfection efficiency, which needs to be changed with transfection medium by centrifugation. This process is cumbersome and not only has the risk of contamination, but also affects the cell state. In order to fundamentally solve this problem, the influence mechanism of key components that inhibit the efficiency of transfection on the transition process need to be explored. First we explored that the key composition that have potential effects on transfection efficiency in the medium is ferric ammonium citrate(FAC), and determined the its inhibitory effect. Then we analyzed its mechanism for inhibiting transit efficiency, including the effects of ferric ammonium citrate on the cell state, PEI-DNA complex formation, and destination gene expression. Results showed that certain amount of FAC had significant inhibitory effect on the transfection that was also gradually enhanced with concentration increasing. Further studies found that the transfection was inhibited only when citrate and iron ions were present at the same time. Over high concentration of FAC increased the particle size of the PEI-DNA complex, making it more difficult to enter the cell. This led to a reduction in the number of complexes entering the cells, and ultimately resulted in a significant drop in cell transfection efficiency. FAC restricted DNA into cells by affecting the size of the PEI-DNA complex, thereby inhibiting PEI-mediated suspended HEK293 cell transfusion process. The inhibitory effect can be eliminated when the FAC concentration was < 20 μmol/L. Through this study, the effect of FAC on the transfection process of PEI-mediated suspended HEK293 cells and its mechanism were deeply understood, providing a solid reference for the development and rational design of the transfection medium for suspended HEK293 cells.