SUN Jin-liang, LI Xing-yan, ZHANG Bi-ru, MI Jun-zhen(
), LIU Jing-hui(
)
Received:2025-12-07
Online:2026-06-08
Contact:
MI Jun-zhen, LIU Jing-hui
E-mail:imaumjz@aliyun.com;cauljh@163.com
SUN Jin-liang, LI Xing-yan, ZHANG Bi-ru, MI Jun-zhen, LIU Jing-hui. Cloning of the Saline-alkali Response Gene AsGolS2 and Screening of Interacting Proteins in Oat[J]. Biotechnology Bulletin, doi: 10.13560/j.cnki.biotech.bull.1985.2025-1333.
作用元件 Functional element | 序列 Sequence | 数量 Number | 功能 Function |
|---|---|---|---|
| ABRE | CACGTG | 1 | 参与脱落酸响应的顺式作用元件 |
| AAGAA-motif | GAAAGAA | 1 | 功能尚未明确表征 |
| AE-box | AGAAACTT | 1 | 光响应模块的组成部分 |
| ARE | AAACCA | 1 | 对厌氧诱导至关重要的顺式调控元件 |
| CAAT-box | CCAAT | 7 | 启动子和增强子区域中常见的顺式作用元件 |
| G-Box | CACGTG | 1 | 参与光响应的顺式调控元件 |
| LTR | CCGAAA | 2 | 参与低温响应的顺式作用元件 |
| MBS | CAACTG | 1 | 参与干旱诱导的MYB结合位点 |
| MYB | CAACAG | 1 | MYB转录因子的结合位点 |
| MYC | CATGTG | 3 | MYC转录因子的结合位点 |
| STRE | AGGGG | 2 | 干旱、盐碱等胁迫响应元件 |
| TCT-motif | TCTTAC | 2 | 光响应元件的一部分 |
| W box | TTGACC | 5 | WRKY转录因子的结合位点 |
Table 1 Major cis-acting elements in the AsGolS2 promoter region
作用元件 Functional element | 序列 Sequence | 数量 Number | 功能 Function |
|---|---|---|---|
| ABRE | CACGTG | 1 | 参与脱落酸响应的顺式作用元件 |
| AAGAA-motif | GAAAGAA | 1 | 功能尚未明确表征 |
| AE-box | AGAAACTT | 1 | 光响应模块的组成部分 |
| ARE | AAACCA | 1 | 对厌氧诱导至关重要的顺式调控元件 |
| CAAT-box | CCAAT | 7 | 启动子和增强子区域中常见的顺式作用元件 |
| G-Box | CACGTG | 1 | 参与光响应的顺式调控元件 |
| LTR | CCGAAA | 2 | 参与低温响应的顺式作用元件 |
| MBS | CAACTG | 1 | 参与干旱诱导的MYB结合位点 |
| MYB | CAACAG | 1 | MYB转录因子的结合位点 |
| MYC | CATGTG | 3 | MYC转录因子的结合位点 |
| STRE | AGGGG | 2 | 干旱、盐碱等胁迫响应元件 |
| TCT-motif | TCTTAC | 2 | 光响应元件的一部分 |
| W box | TTGACC | 5 | WRKY转录因子的结合位点 |
| 序号 No. | 基因标识符 Gene ID | 蛋白名称 Protein name | 分子功能 Molecular function |
|---|---|---|---|
| 4 | AVESA.00001b.r3.7Ag0000572 | 6-磷酸葡萄糖酸脱氢酶 6-phosphogluconate dehydrogenase | NADP结合;磷酸葡萄糖酸脱氢酶(脱羧)活性 |
| 5 | AVESA.00001b.r3.1Dg0003031 | 糖转运蛋白MST4 Sugar transport protein MST4 | 跨膜转运蛋白活性 |
| 9 | AVESA.00001b.r3.4Ag0001257 | 30S核糖体蛋白S13 30S ribosomal protein S13 | 核糖体结构组成;RNA结合;核酸结合 |
| 11 | AVESA.00001b.r3.2Cg0002211 | S-腺苷甲硫氨酸脱羧酶原酶 S-adenosylmethionine decarboxylase proenzyme | 腺苷甲硫氨酸脱羧酶活性 |
| 13 | AVESA.00001b.r3.7Cg0001500 | 丝氨酸羧肽酶样18 Serine carboxypeptidase-like 18 | 丝氨酸型羧肽酶活性 |
| 14 | AVESA.00001b.r3.2Dg0003272 | 未表征的氧化还原酶At1g06690 Uncharacterized oxidoreductase At1g06690 | 氧化还原酶活性 |
| 19 | AVESA.00001b.r3.6Cg0000485 | 蛋白质高叶绿素荧光表型173 Protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 | RNA结合;光系统Ⅱ组装 |
| 24 | AVESA.00001b.r3.5Dg0001084 | 喹啉酸合成酶 Quinolinate synthase | [4Fe-4S]簇结合;喹啉酸合成酶A活性 |
| 25 | AVESA.00001b.r3.5Cg0003292 | 伴侣蛋白dnaJ GFA2 Chaperone protein dnaJ GFA2 | ATP结合;热休克蛋白结合;未折叠蛋白结合 |
| 34 | AVESA.00001b.r3.3Cg0001710 | SUN结构域包含蛋白2 SUN domain-containing protein 2 | 蛋白质-膜锚定活性 |
| 35 | AVESA.00001b.r3.6Cg0002056 | 外膜蛋白80 Outer envelope protein 80 | 叶绿体组织 |
| 39 | AVESA.00001b.r3.6Ag0001123 | 磷酸核酮糖激酶 Phosphoribulokinase | ATP结合;激酶活性;磷酸核酮糖激酶活性 |
| 40 | AVESA.00001b.r3.1Ag0001739 | 转录因子VOZ1 Transcription factor VOZ1 | 序列特异性DNA结合;锌离子结合 |
| 42 | AVESA.00001b.r3.7Cg0000571 | 过氧化物酶体(S)-2-羟基酸氧化酶GLO1 Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 | 氧化还原酶活性;FMN结合 |
| 43 | AVESA.00001b.r3.5Dg0000088 | 丝氨酸/苏氨酸蛋白激酶OSK4 Serine/threonine protein kinase OSK4 | ATP结合;蛋白激酶活性 |
| 44 | AVESA.00001b.r3.7Dg0001328 | 木葡聚糖内转糖基化酶/水解酶蛋白8 Xyloglucan endotransglycosylase/hydrolase protein 8 | 水解酶活性;木葡聚糖;木糖基转移酶活性 |
| 54 | AVESA.00001b.r3.7Dg0002332 | 可能的α-甘露糖苷酶At5g13980 Probable alpha-mannosidase At5g13980 | 催化活性;α-甘露糖苷酶活性;碳水化合物结合 |
| 61 | AVESA.00001b.r3.3Ag0001245 | S-腺苷甲硫氨酸合成酶1 S-adenosylmethionine synthase 1 | ATP结合;甲硫氨酸腺苷转移酶活性 |
| 66 | AVESA.00001b.r3.7Ag0001375 | C末端加工肽酶3 Carboxyl-terminal-processing peptidase 3 | 蛋白质结合;丝氨酸型肽酶活性 |
| 68 | AVESA.00001b.r3.7Cg0002489 | 晚胚轴富集蛋白 Protein LATE ELONGATED HYPOCOTYL | 转录顺式调控区域结合 |
| 71 | AVESA.00001b.r3.1Dg0002098 | 蛋白酶Do样1 Protease Do-like 1 | 丝氨酸型内肽酶活性;蛋白质结合 |
| 72 | AVESA.00001b.r3.2Dg0003778 | 12S种子贮藏球蛋白1 12S seed storage globulin 1 | 营养储存物活性 |
| 80 | AVESA.00001b.r3.6Ag0000732 | 甲硫氨酸氨肽酶1D Methionine aminopeptidase 1D | 起始甲硫氨酰氨肽酶活性;金属离子结合;金属氨肽酶活性 |
| 84 | AVESA.00001b.r3.5Cg0000202 | 肽基-脯氨酰顺反异构酶FKBP16-3 Peptidyl-prolyl cis-trans isomerase FKBP16-3 | 肽基-脯氨酰顺反异构酶活性 |
| 85 | AVESA.00001b.r3.6Cg0002058 | 富马酰乙酰乙酰酶 Fumarylacetoacetase | 催化活性;延胡索酰乙酰乙酸酶活性 |
| 89 | AVESA.00001b.r3.6Ag0001269 | 伴侣蛋白dnaJ A6 Chaperone protein dnaJ A6 | 蛋白折叠;热休克蛋白结合;未折叠蛋白结合;Hsp70蛋白结合 |
| 90 | AVESA.00001b.r3.5Dg0002096 | 硫醇蛋白酶aleurain Thiol protease aleurain | 半胱氨酸型内肽酶活性 |
| 93 | AVESA.00001b.r3.5Dg0002008 | 聚泛素8 Polyubiquitin 8 | 蛋白质结合 |
| 94 | AVESA.00001b.r3.2Dg0002768 | 肽基-脯氨酰顺反异构酶FKBP20-2 Peptidyl-prolyl cis-trans isomerase FKBP20-2 | 肽基-脯氨酰顺反异构酶活性 |
| 96 | AVESA.00001b.r3.5Ag0002377 | 染色质重塑蛋白EBS Chromatin remodeling protein EBS | 染色质结合 |
| 6, 79, 91 | AVESA.00001b.r3.1Dg0002877, AVESA.00001b.r3.4Cg0003529, AVESA.00001b.r3.4Cg0003528 | 烯醇化酶 Enolase | 镁离子结合;磷酸丙酮酸水合酶活性 |
| 12, 16 | AVESA.00001b.r3.6Ag0000268, AVESA.00001b.r3.2Dg0001159 | 脂氧合酶2.3 Lipoxygenase 2.3 | 金属离子结合;氧化还原酶活性 |
| 53, 77, 81, 92 | AVESA.00001b.r3.6Dg0001185, AVESA.00001b.r3.6Ag0001496, AVESA.00001b.r3.7Dg0001656, AVESA.00001b.r3.6Cg0003509 | 甘油醛-3-磷酸脱氢酶 Glyceraldehyde-3-phosphate dehydrogenase | NAD结合;NADP结合;氧化还原酶活性 |
| 58, 83 | AVESA.00001b.r3.6Ag0002227, AVESA.00001b.r3.2Cg0000580 | 类囊体形成蛋白1 Protein THYLAKOID FORMATION1 | 光系统Ⅱ组装 |
| 2, 18, 33, 73 | AVESA.00001b.r3.2Cg0001041, AVESA.00001b.r3.2Dg0001209, AVESA.00001b.r3.1Cg0001552, AVESA.00001b.r3.Ung0000271 | 未知蛋白 Unknown protein |
Table 2 Candidate interacting proteins of AsGolS2
| 序号 No. | 基因标识符 Gene ID | 蛋白名称 Protein name | 分子功能 Molecular function |
|---|---|---|---|
| 4 | AVESA.00001b.r3.7Ag0000572 | 6-磷酸葡萄糖酸脱氢酶 6-phosphogluconate dehydrogenase | NADP结合;磷酸葡萄糖酸脱氢酶(脱羧)活性 |
| 5 | AVESA.00001b.r3.1Dg0003031 | 糖转运蛋白MST4 Sugar transport protein MST4 | 跨膜转运蛋白活性 |
| 9 | AVESA.00001b.r3.4Ag0001257 | 30S核糖体蛋白S13 30S ribosomal protein S13 | 核糖体结构组成;RNA结合;核酸结合 |
| 11 | AVESA.00001b.r3.2Cg0002211 | S-腺苷甲硫氨酸脱羧酶原酶 S-adenosylmethionine decarboxylase proenzyme | 腺苷甲硫氨酸脱羧酶活性 |
| 13 | AVESA.00001b.r3.7Cg0001500 | 丝氨酸羧肽酶样18 Serine carboxypeptidase-like 18 | 丝氨酸型羧肽酶活性 |
| 14 | AVESA.00001b.r3.2Dg0003272 | 未表征的氧化还原酶At1g06690 Uncharacterized oxidoreductase At1g06690 | 氧化还原酶活性 |
| 19 | AVESA.00001b.r3.6Cg0000485 | 蛋白质高叶绿素荧光表型173 Protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 | RNA结合;光系统Ⅱ组装 |
| 24 | AVESA.00001b.r3.5Dg0001084 | 喹啉酸合成酶 Quinolinate synthase | [4Fe-4S]簇结合;喹啉酸合成酶A活性 |
| 25 | AVESA.00001b.r3.5Cg0003292 | 伴侣蛋白dnaJ GFA2 Chaperone protein dnaJ GFA2 | ATP结合;热休克蛋白结合;未折叠蛋白结合 |
| 34 | AVESA.00001b.r3.3Cg0001710 | SUN结构域包含蛋白2 SUN domain-containing protein 2 | 蛋白质-膜锚定活性 |
| 35 | AVESA.00001b.r3.6Cg0002056 | 外膜蛋白80 Outer envelope protein 80 | 叶绿体组织 |
| 39 | AVESA.00001b.r3.6Ag0001123 | 磷酸核酮糖激酶 Phosphoribulokinase | ATP结合;激酶活性;磷酸核酮糖激酶活性 |
| 40 | AVESA.00001b.r3.1Ag0001739 | 转录因子VOZ1 Transcription factor VOZ1 | 序列特异性DNA结合;锌离子结合 |
| 42 | AVESA.00001b.r3.7Cg0000571 | 过氧化物酶体(S)-2-羟基酸氧化酶GLO1 Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 | 氧化还原酶活性;FMN结合 |
| 43 | AVESA.00001b.r3.5Dg0000088 | 丝氨酸/苏氨酸蛋白激酶OSK4 Serine/threonine protein kinase OSK4 | ATP结合;蛋白激酶活性 |
| 44 | AVESA.00001b.r3.7Dg0001328 | 木葡聚糖内转糖基化酶/水解酶蛋白8 Xyloglucan endotransglycosylase/hydrolase protein 8 | 水解酶活性;木葡聚糖;木糖基转移酶活性 |
| 54 | AVESA.00001b.r3.7Dg0002332 | 可能的α-甘露糖苷酶At5g13980 Probable alpha-mannosidase At5g13980 | 催化活性;α-甘露糖苷酶活性;碳水化合物结合 |
| 61 | AVESA.00001b.r3.3Ag0001245 | S-腺苷甲硫氨酸合成酶1 S-adenosylmethionine synthase 1 | ATP结合;甲硫氨酸腺苷转移酶活性 |
| 66 | AVESA.00001b.r3.7Ag0001375 | C末端加工肽酶3 Carboxyl-terminal-processing peptidase 3 | 蛋白质结合;丝氨酸型肽酶活性 |
| 68 | AVESA.00001b.r3.7Cg0002489 | 晚胚轴富集蛋白 Protein LATE ELONGATED HYPOCOTYL | 转录顺式调控区域结合 |
| 71 | AVESA.00001b.r3.1Dg0002098 | 蛋白酶Do样1 Protease Do-like 1 | 丝氨酸型内肽酶活性;蛋白质结合 |
| 72 | AVESA.00001b.r3.2Dg0003778 | 12S种子贮藏球蛋白1 12S seed storage globulin 1 | 营养储存物活性 |
| 80 | AVESA.00001b.r3.6Ag0000732 | 甲硫氨酸氨肽酶1D Methionine aminopeptidase 1D | 起始甲硫氨酰氨肽酶活性;金属离子结合;金属氨肽酶活性 |
| 84 | AVESA.00001b.r3.5Cg0000202 | 肽基-脯氨酰顺反异构酶FKBP16-3 Peptidyl-prolyl cis-trans isomerase FKBP16-3 | 肽基-脯氨酰顺反异构酶活性 |
| 85 | AVESA.00001b.r3.6Cg0002058 | 富马酰乙酰乙酰酶 Fumarylacetoacetase | 催化活性;延胡索酰乙酰乙酸酶活性 |
| 89 | AVESA.00001b.r3.6Ag0001269 | 伴侣蛋白dnaJ A6 Chaperone protein dnaJ A6 | 蛋白折叠;热休克蛋白结合;未折叠蛋白结合;Hsp70蛋白结合 |
| 90 | AVESA.00001b.r3.5Dg0002096 | 硫醇蛋白酶aleurain Thiol protease aleurain | 半胱氨酸型内肽酶活性 |
| 93 | AVESA.00001b.r3.5Dg0002008 | 聚泛素8 Polyubiquitin 8 | 蛋白质结合 |
| 94 | AVESA.00001b.r3.2Dg0002768 | 肽基-脯氨酰顺反异构酶FKBP20-2 Peptidyl-prolyl cis-trans isomerase FKBP20-2 | 肽基-脯氨酰顺反异构酶活性 |
| 96 | AVESA.00001b.r3.5Ag0002377 | 染色质重塑蛋白EBS Chromatin remodeling protein EBS | 染色质结合 |
| 6, 79, 91 | AVESA.00001b.r3.1Dg0002877, AVESA.00001b.r3.4Cg0003529, AVESA.00001b.r3.4Cg0003528 | 烯醇化酶 Enolase | 镁离子结合;磷酸丙酮酸水合酶活性 |
| 12, 16 | AVESA.00001b.r3.6Ag0000268, AVESA.00001b.r3.2Dg0001159 | 脂氧合酶2.3 Lipoxygenase 2.3 | 金属离子结合;氧化还原酶活性 |
| 53, 77, 81, 92 | AVESA.00001b.r3.6Dg0001185, AVESA.00001b.r3.6Ag0001496, AVESA.00001b.r3.7Dg0001656, AVESA.00001b.r3.6Cg0003509 | 甘油醛-3-磷酸脱氢酶 Glyceraldehyde-3-phosphate dehydrogenase | NAD结合;NADP结合;氧化还原酶活性 |
| 58, 83 | AVESA.00001b.r3.6Ag0002227, AVESA.00001b.r3.2Cg0000580 | 类囊体形成蛋白1 Protein THYLAKOID FORMATION1 | 光系统Ⅱ组装 |
| 2, 18, 33, 73 | AVESA.00001b.r3.2Cg0001041, AVESA.00001b.r3.2Dg0001209, AVESA.00001b.r3.1Cg0001552, AVESA.00001b.r3.Ung0000271 | 未知蛋白 Unknown protein |
Fig. 1 Sequence polymorphism analysis of AsGolS2A: Schematic diagram of polymorphic sites. Black vertical lines indicate the mutation sites of single nucleotide; red vertical lines indicate insertion-deletion sites. B: Detailed list of the specific variation sites shown in Fig. A
Fig. 4 Construction and quality assessment of the cDNA libraryA: Electrophoresis of dscDNA. M: Marker DL5 000. 1: Control (CK); 2: Y1; 3: Y2. B: Electrophoresis after normalization and removal of short fragments. C: Determination of library titer. D: Assessment of library quality
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