Biotechnology Bulletin ›› 2024, Vol. 40 ›› Issue (4): 122-129.doi: 10.13560/j.cnki.biotech.bull.1985.2023-1082
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DU Ze-guang(), REN Shao-wen, ZHANG Feng-qin, LI Mei-lan, LI Gai-zhen, QI Xian-hui()
Received:
2023-11-17
Online:
2024-04-26
Published:
2024-04-30
Contact:
QI Xian-hui
E-mail:1527246146@qq.com;651345642@qq.com
DU Ze-guang, REN Shao-wen, ZHANG Feng-qin, LI Mei-lan, LI Gai-zhen, QI Xian-hui. Cloning,Expression and Functional Identification of BrMLP328 Gene in Brassica rapa subsp. pekinensis[J]. Biotechnology Bulletin, 2024, 40(4): 122-129.
用途 Purpose | 名称 Name | 序列 Sequence(5'-3') |
---|---|---|
基因克隆 Gene cloning | 026653-1 | F:ATGGCGACGTCGGGAACA R:TTAAGCTTTGACGACATGATTGTCC |
大白菜RT-qPCR Fluorescent quantitative PCR in Chinese cabbage | ACTIN | F:CGGTGTCATGGTTGGGAGA R:CGTGCTCGATGGGGTACTTC |
026653-2 | F:CCACCACATCCAAGGTGTCA R:AACACCTCCGGTTTCCCATC | |
阳性鉴定 Positive identification | 026653-3 | F:GACGCACAATCCCACTATCC R:TCGGTTCGCTTCTCCCAGAT |
拟南芥RT-qPCR Fluorescent quantitative PCR in Arabidopsis thaliana | ACTII | F:CACACTGGAGTGATGGTTGG R:ATTGGCCTTGGGGTTAAGAG |
Table 1 Primer sequences used in the experiment
用途 Purpose | 名称 Name | 序列 Sequence(5'-3') |
---|---|---|
基因克隆 Gene cloning | 026653-1 | F:ATGGCGACGTCGGGAACA R:TTAAGCTTTGACGACATGATTGTCC |
大白菜RT-qPCR Fluorescent quantitative PCR in Chinese cabbage | ACTIN | F:CGGTGTCATGGTTGGGAGA R:CGTGCTCGATGGGGTACTTC |
026653-2 | F:CCACCACATCCAAGGTGTCA R:AACACCTCCGGTTTCCCATC | |
阳性鉴定 Positive identification | 026653-3 | F:GACGCACAATCCCACTATCC R:TCGGTTCGCTTCTCCCAGAT |
拟南芥RT-qPCR Fluorescent quantitative PCR in Arabidopsis thaliana | ACTII | F:CACACTGGAGTGATGGTTGG R:ATTGGCCTTGGGGTTAAGAG |
软件名称 Software name | 软件网址 Software website |
---|---|
ProtParam | http://web.expasy.org/protparam/ |
ProtScale | http://web.expasy.org/protscale/ |
SOPMA | http://npsa-pbil.ibcp.fr/cgi-bin/npsa_automat.pl?page=npsa_sopm.html |
SWISS-MODEL | http://swissmodel.expasy.org/ |
Plant-mPLoc | http://www.csbio.sjtu.edu.cn/bioinf/plantmulti/ |
Table 2 Primary online software employed in the experiment
软件名称 Software name | 软件网址 Software website |
---|---|
ProtParam | http://web.expasy.org/protparam/ |
ProtScale | http://web.expasy.org/protscale/ |
SOPMA | http://npsa-pbil.ibcp.fr/cgi-bin/npsa_automat.pl?page=npsa_sopm.html |
SWISS-MODEL | http://swissmodel.expasy.org/ |
Plant-mPLoc | http://www.csbio.sjtu.edu.cn/bioinf/plantmulti/ |
Fig. 2 Bioinformatics analysis of BrMLP328 A: Multiple alignment of BrMLP328 amino acid sequences. B: Phylogenetic tree of BrMLP328 homologous proteins. C: Analysis of hydrophilicity and hydrophobicity of BrMLP328. D: Prediction of secondary structures of BrMLP328 proteins. E: Prediction of tertiary structures of BrMLP328 proteins
Fig. 4 Screening and positive identification of T1 resistant plants A: Screening of resistant plants in T1 generation. B: Positive identification of resistant plants in T1 generation.(M: DL2000 marker. Label 1-3 is the number of resistant seedlings. “-” is the pure water blank control, “+” is the plasmid control and “WT” is the wild type plant control.)
T1代植株编号 Number of T1 plant | T2代植株开花时间 Days of flowering after sowing of T2 plant/d | 比野生型植株延迟开花天数 Average number of days in flowering later than the wild type/d |
---|---|---|
WT | 21.23 ± 0.45 | - |
Bra026653-1 | 24.32 ± 1.62 | 3.09 |
Bra026653-2 | 22.69 ± 2.38 | 1.46 |
Bra026653-3 | 23.26 ± 0.94 | 2.03 |
Table 3 Statistics of flowering time between T2 transgenic plants and the wild type
T1代植株编号 Number of T1 plant | T2代植株开花时间 Days of flowering after sowing of T2 plant/d | 比野生型植株延迟开花天数 Average number of days in flowering later than the wild type/d |
---|---|---|
WT | 21.23 ± 0.45 | - |
Bra026653-1 | 24.32 ± 1.62 | 3.09 |
Bra026653-2 | 22.69 ± 2.38 | 1.46 |
Bra026653-3 | 23.26 ± 0.94 | 2.03 |
[1] |
赖佳, 韦树谷, 黄玲, 等. 白菜类蔬菜种质资源抽薹性状鉴定评价[J]. 中国农学通报, 2022, 38(28): 41-47.
doi: 10.11924/j.issn.1000-6850.casb2022-0410 |
Lai J, Wei SG, Huang L, et al. Identification and evaluation on bolting traits of Chinese cabbage group germplasm resources[J]. Chin Agric Sci Bull, 2022, 38(28): 41-47.
doi: 10.11924/j.issn.1000-6850.casb2022-0410 |
|
[2] |
Su TB, Wang WH, Li PR, et al. A genomic variation map provides insights into the genetic basis of spring Chinese cabbage(Brassica rapa ssp. pekinensis)selection[J]. Mol Plant, 2018, 11(11): 1360-1376.
doi: 10.1016/j.molp.2018.08.006 URL |
[3] | 周麟笔, 马关鹏, 赵夏云, 等. 大白菜BrFLC及BrFRI-LIKE基因对低温的响应及其与抽薹性状的关系研究[J]. 种子, 2023, 42(4): 41-48. |
Zhou LB, Ma GP, Zhao XY, et al. Response of BrFLC and BrFRI-LIKE genes to low temperature and their relationship with bolting trait in Chinese cabbage[J]. Seed, 2023, 42(4): 41-48. | |
[4] | 罗睿, 郭建军. 植物开花时间: 自然变异与遗传分化[J]. 植物学报, 2010, 45(1): 109-118. |
Luo R, Guo JJ. Plant flowering time: natural variation in the field and its role in determining genetic differentiation[J]. Chin Bull Bot, 2010, 45(1): 109-118. | |
[5] | Li X, Shen CW, Chen RX, et al. Function of BrSOC1b gene in flowering regulation of Chinese cabbage and its protein interaction[J]. Planta, 2023, 258(1): 21. |
[6] |
Nessler CL, Burnett RJ. Organization of the major latex protein gene family in opium poppy[J]. Plant Mol Biol, 1992, 20(4): 749-752.
doi: 10.1007/BF00046460 pmid: 1450390 |
[7] |
Nessler CL, Kurz WGW, Pelcher LE. Isolation and analysis of the major latex protein genes of opium poppy[J]. Plant Mol Biol, 1990, 15(6): 951-953.
pmid: 2103486 |
[8] |
Pozueta-Romero J, Klein M, Houlné G, et al. Characterization of a family of genes encoding a fruit-specific wound-stimulated protein of bell pepper(Capsicum annuum): identification of a new family of transposable elements[J]. Plant Mol Biol, 1995, 28(6): 1011-1025.
pmid: 7548820 |
[9] |
Chen JY, Dai XF. Cloning and characterization of the Gossypium hirsutum major latex protein gene and functional analysis in Arabidopsis thaliana[J]. Planta, 2010, 231(4): 861-873.
doi: 10.1007/s00425-009-1092-2 URL |
[10] | 李瑶, 王雷, 吴琼, 等. 植物乳胶蛋白研究进展[J]. 现代农业科技, 2021(19): 202-204. |
Li Y, Wang L, Wu Q, et al. Research progress of plant latex protein[J]. Mod Agric Sci Technol, 2021(19): 202-204. | |
[11] | 王雷, 孙尧, 李瑶, 等. 植物乳胶蛋白研究进展[J]. 安徽农业科学, 2021, 49(10): 12-14. |
Wang L, Sun Y, Li Y, et al. Research progress of plant major latex protein[J]. J Anhui Agric Sci, 2021, 49(10): 12-14. | |
[12] | 刘倩莹. 甘蓝MLP基因家族分析与BoMLP423的功能研究[D]. 重庆: 西南大学, 2022. |
Liu QY. Analysis of MLP family genes and functional research of BoMLP423 in Brassica oleracea[D]. Chongqing: Southwest University, 2022. | |
[13] |
Guo D, Wong WS, Xu WZ, et al. Cis-cinnamic acid-enhanced 1 gene plays a role in regulation of Arabidopsis bolting[J]. Plant Mol Biol, 2011, 75(4-5): 481-495.
doi: 10.1007/s11103-011-9746-4 pmid: 21298397 |
[14] |
Phee BK, Park S, Cho JH, et al. Comparative proteomic analysis of blue light signaling components in the Arabidopsis cryptochrome 1 mutant[J]. Mol Cells, 2007, 23(2): 154-160.
doi: 10.1016/S1016-8478(23)07368-5 URL |
[15] |
Mockler TC, Yu XH, Shalitin D, et al. Regulation of flowering time in Arabidopsis by K homology domain proteins[J]. Proc Natl Acad Sci USA, 2004, 101(34): 12759-12764.
doi: 10.1073/pnas.0404552101 pmid: 15310842 |
[16] |
Osmark P, Boyle B, Brisson N. Sequential and structural homology between intracellular pathogenesis-related proteins and a group of latex proteins[J]. Plant Mol Biol, 1998, 38(6): 1243-1246.
pmid: 9869429 |
[17] | Zhu LM, Ni WC, Liu S, et al. Transcriptomics analysis of apple leaves in response to Alternaria alternata apple pathotype infection[J]. Front Plant Sci, 2017, 8: 22. |
[18] |
Ruperti B, Bonghi C, Ziliotto F, et al. Characterization of a major latex protein(MLP)gene down-regulated by ethylene during peach fruitlet abscission[J]. Plant Sci, 2002, 163(2): 265-272.
doi: 10.1016/S0168-9452(02)00094-8 URL |
[19] |
Shang MY, Wang XT, Zhang J, et al. Genetic regulation of GA metabolism during vernalization, floral bud initiation and development in pak choi(Brassica rapa ssp. chinensis makino)[J]. Front Plant Sci, 2017, 8: 1533.
doi: 10.3389/fpls.2017.01533 URL |
[20] | 宋红霞. 普通白菜成花转变基因表达谱比较及BrcLFY基因克隆与表达分析[D]. 晋中: 山西农业大学, 2016. |
Song HX. Comparison of floral transition gene expression profiles and cloning and expression analysis of BrcLFY gene in Chinese cabbage[D]. Jinzhong: Shanxi Agricultural University, 2016. | |
[21] |
Thompson JD, Higgins DG, Gibson TJ. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice[J]. Nucleic Acids Res, 1994, 22(22): 4673-4680.
doi: 10.1093/nar/22.22.4673 pmid: 7984417 |
[22] |
Sarwar R, Geng R, Li L, et al. Genome-wide prediction, functional divergence, and characterization of stress-responsive BZR transcription factors in B. napus[J]. Front Plant Sci, 2022, 12: 790655.
doi: 10.3389/fpls.2021.790655 URL |
[23] | 孙菲菲, 蒋芳玲, 侯喜林, 等. 白菜亚硝酸还原酶基因BcNiR的克隆及表达分析[J]. 园艺学报, 2009, 36(10): 1511-1518. |
Sun FF, Jiang FL, Hou XL, et al. Molecular cloning and characterization of nitrite reductase gene BcNiR from non-heading Chinese cabbage[J]. Acta Hortic Sin, 2009, 36(10): 1511-1518. | |
[24] |
Yuan GP, He SS, Bian SX, et al. Genome-wide identification and expression analysis of major latex protein(MLP)family genes in the apple(Malus domestica Borkh.) genome[J]. Gene, 2020, 733: 144275.
doi: 10.1016/j.gene.2019.144275 URL |
[25] |
Goto J, Iwabuchi A, Yoshihara R, et al. Uptake mechanisms of polychlorinated biphenyls in Cucurbita pepo via xylem sap containing major latex-like proteins[J]. Environ Exp Bot, 2019, 162: 399-405.
doi: 10.1016/j.envexpbot.2019.03.019 URL |
[26] | He SS, Yuan GP, Bian SX, et al. Major latex protein MdMLP423 negatively regulates defense against fungal infections in apple[J]. Int J Mol Sci, 2020, 21(5): 1879. |
[27] |
Inui H, Sawada M, Goto J, et al. A major latex-like protein is a key factor in crop contamination by persistent organic pollutants[J]. Plant Physiol, 2013, 161(4): 2128-2135.
doi: 10.1104/pp.112.213645 pmid: 23404917 |
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