Biotechnology Bulletin ›› 2024, Vol. 40 ›› Issue (7): 163-171.doi: 10.13560/j.cnki.biotech.bull.1985.2024-0162
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ZANG Wen-rui(), MA Ming, CHE Gen, HASI Agula()
Received:
2024-02-18
Online:
2024-07-26
Published:
2024-07-30
Contact:
HASI Agula
E-mail:1211589256@qq.com;hasiagula@imu.edu.cn
ZANG Wen-rui, MA Ming, CHE Gen, HASI Agula. Genome-wide Identification and Expression Pattern Analysis of BZR Transcription Factor Gene Family of Melon[J]. Biotechnology Bulletin, 2024, 40(7): 163-171.
基因名称 Gene name | 登录号Accession No. | 染色体分布Chromosome distribution | 染色体座位Chromosomal loci/bp | ORF /bp | 氨基酸数量Number of amino acids | 分子量Molecular weight/kD | 等电点Isoelectric point(pI) |
---|---|---|---|---|---|---|---|
CmBZR1 | MELO3C010925.2.1 | Chr 03 | 29999092-30000475 | 936 | 311 | 34.05 | 9.16 |
CmBES1 | MELO3C007804.2.1 | Chr 08 | 5468519-5471484 | 960 | 319 | 34.71 | 8.96 |
CmBEH1 | MELO3C016213.2.1 | Chr 07 | 22268773-22275513 | 1 932 | 643 | 75.11 | 5.90 |
CmBEH2 | MELO3C021214.2.1 | Chr 11 | 31280641-31285843 | 2 046 | 681 | 78.21 | 5.74 |
CmBEH3 | MELO3C016121.2.1 | Chr 07 | 20822745-20826732 | 978 | 325 | 34.70 | 8.50 |
CmBEH4 | MELO3C002681.2.1 | Chr 12 | 22058946-22061841 | 984 | 327 | 39.52 | 9.00 |
Table 1 Basic information of BZR family members in melon
基因名称 Gene name | 登录号Accession No. | 染色体分布Chromosome distribution | 染色体座位Chromosomal loci/bp | ORF /bp | 氨基酸数量Number of amino acids | 分子量Molecular weight/kD | 等电点Isoelectric point(pI) |
---|---|---|---|---|---|---|---|
CmBZR1 | MELO3C010925.2.1 | Chr 03 | 29999092-30000475 | 936 | 311 | 34.05 | 9.16 |
CmBES1 | MELO3C007804.2.1 | Chr 08 | 5468519-5471484 | 960 | 319 | 34.71 | 8.96 |
CmBEH1 | MELO3C016213.2.1 | Chr 07 | 22268773-22275513 | 1 932 | 643 | 75.11 | 5.90 |
CmBEH2 | MELO3C021214.2.1 | Chr 11 | 31280641-31285843 | 2 046 | 681 | 78.21 | 5.74 |
CmBEH3 | MELO3C016121.2.1 | Chr 07 | 20822745-20826732 | 978 | 325 | 34.70 | 8.50 |
CmBEH4 | MELO3C002681.2.1 | Chr 12 | 22058946-22061841 | 984 | 327 | 39.52 | 9.00 |
Fig. 1 Analysis of CmBZR protein sequences A: Multiple sequence alignment of 6 CmBZR proteins; B: conserved sites of BZR domains in CmBZR sequences. *: Conserved motif of CmBZR protein sequences
Fig. 3 Phylogenetic tree analysis of BZR proteins from Arabidopsis,Oryza sativa,Solanum lycopersicon,Cucumis sativus,Cucurbita moschata and C. smelo I-V indicates different subfamily of BZR members in six species
Fig. 5 Expression analysis of CmBZR in melon A: Heat map of 6 CmBZR genes expressed differently in different tissues of melon;B: expression profiles of CmBZR genes in melon’s Rt, S, L, FF, MF, O, G,R, C and P, and they indicate the root, stem, leaf, female flower, male flower, ovary, growing stage, ripening stage, climacteric stage, and post-climacteric stage fruit, respectively.
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